RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TMEM120BA0PK00 339 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 FADS2P1A8MWK0 482 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 COPEO14579 308 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 MPOP05164 745 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 TPMTP51580 245 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 TAS2R39P59534 338 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 ITIH4Q14624 930 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 SEL1L3Q68CR1 1132 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 ANO7Q6IWH7 933 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 KIAA1161Q6NSJ0 714 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 BANPQ8N9N5 519 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 GDAP1Q8TB36 358 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 APOPT1Q96IL0 206 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 CABS1Q96KC9 395 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 HHIPQ96QV1 700 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 COPS8Q99627 209 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 BOCQ9BWV1 1114 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 SLC13A1Q9BZW2 595 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 CLPBQ9H078 707 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 PREBQ9HCU5 417 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 CD93Q9NPY3 652 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 SMOXQ9NWM0 555 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 KCTD5Q9NXV2 234 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 VWA7Q9Y334 891 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 TBC1D3DA0A087WVF3 549 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TBC1D3IA0A087WXS9 549 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TBC1D3EA0A087X179 549 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TBC1D3KA0A087X1G2 549 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 A0A096LPK6 155 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TBC1D3FA6NER0 549 aaPredicted RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TBC1D3LB9A6J9 549 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 PRMT5O14744 637 aaPredicted RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 PRPF4O43172 522 aaKnown RBP eCLIP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 PHGDHO43175 533 aaKnown RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TYROBPO43914 113 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 RNGTTO60942 597 aaKnown RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TBC1D3HP0C7X1 549 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 PKMP14618 531 aaKnown RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 GYS2P54840 703 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 RAB10P61026 200 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 RPS21P63220 83 aaKnown RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 PDE1CQ14123 709 aaPredicted RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TAF1BQ53T94 588 aaPredicted RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 PPM1JQ5JR12 505 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 GPRC6AQ5T6X5 926 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TBC1D3GQ6DHY5 549 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 RAET1GQ6H3X3 334 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TBC1D3CQ6IPX1 549 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 CEP97Q8IW35 865 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TBC1D3Q8IZP1 549 aaPredicted RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 ANKRD42Q8N9B4 389 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 CCDC97Q96F63 343 aaPredicted RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 NECAB3Q96P71 396 aaPredicted RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 OLFM1Q99784 485 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 P2RY12Q9H244 342 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 CHRDQ9H2X0 955 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 CNOT10Q9H9A5 744 aaKnown RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TLK1Q9UKI8 766 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 TMPRSS11EQ9UL52 423 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 ZFR2Q9UPR6 939 aaKnown RBP16.02■□□□□ 0.15
TRAF3-204ENST00000539721 PCDHB1Q9Y5F3 818 aa16.02■□□□□ 0.15
TRAF3-204ENST00000539721 A0A1W2PQU0 124 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 RHOBTB1O94844 696 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 ESR1P03372 595 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 C2P06681 752 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 FDXRP22570 491 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 RPS3P23396 243 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRAF3-204ENST00000539721 CRABP2P29373 138 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 GPR1P46091 355 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 PGGT1BP53609 377 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 ADARP55265 1226 aaKnown RBP16.01■□□□□ 0.15
TRAF3-204ENST00000539721 CDKN2DP55273 166 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 DPTQ07507 201 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 ZNF460Q14592 562 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 ZKSCAN8Q15776 578 aaPredicted RBP16.01■□□□□ 0.15
TRAF3-204ENST00000539721 CTSL3PQ5NE16 218 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 BTN2A2Q8WVV5 523 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 CLDN23Q96B33 292 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 BIRC8Q96P09 236 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 VPS35Q96QK1 796 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 IQCGQ9H095 443 aaKnown RBP16.01■□□□□ 0.15
TRAF3-204ENST00000539721 ITM2CQ9NQX7 267 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 MKS1Q9NXB0 559 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 NKIRAS1Q9NYS0 192 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 USP36Q9P275 1121 aaKnown RBP16.01■□□□□ 0.15
TRAF3-204ENST00000539721 GNPTGQ9UJJ9 305 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 SIT1Q9Y3P8 196 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 COMMD10Q9Y6G5 202 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 NUMA1Q14980 2115 aa16.01■□□□□ 0.15
TRAF3-204ENST00000539721 AKT1P31749 480 aa16■□□□□ 0.15
TRAF3-204ENST00000539721 NSG1P42857 185 aa16■□□□□ 0.15
TRAF3-204ENST00000539721 RPS9P46781 194 aaKnown RBP16■□□□□ 0.15
TRAF3-204ENST00000539721 CSRP3P50461 194 aa16■□□□□ 0.15
TRAF3-204ENST00000539721 SGCGQ13326 291 aa16■□□□□ 0.15
TRAF3-204ENST00000539721 NEK5Q6P3R8 708 aa16■□□□□ 0.15
TRAF3-204ENST00000539721 NLRP8Q86W28 1048 aa16■□□□□ 0.15
TRAF3-204ENST00000539721 HORMAD1Q86X24 394 aa16■□□□□ 0.15
TRAF3-204ENST00000539721 PELI3Q8N2H9 469 aa16■□□□□ 0.15
TRAF3-204ENST00000539721 SPEM1Q8N4L4 309 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms