RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 IST1P53990 364 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 ZNF33AQ06730 810 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 IRAK1BP1Q5VVH5 260 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 CCDC117Q8IWD4 279 aaPredicted RBP20.18■□□□□ 0.82
TMEM260-203ENST00000539559 HMCESQ96FZ2 354 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 HBEGFQ99075 208 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 ADNPQ9H2P0 1102 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 BLOC1S6Q9UL45 172 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 GPR45Q9Y5Y3 372 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 DGKBQ9Y6T7 804 aa20.18■□□□□ 0.82
TMEM260-203ENST00000539559 HAS3O00219 553 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 GOT2P00505 430 aaKnown RBP20.17■□□□□ 0.82
TMEM260-203ENST00000539559 C1RP00736 705 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 MMP2P08253 660 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 RXRGP48443 463 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 SCNN1GP51170 649 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 PPP1R8Q12972 351 aaKnown RBP20.17■□□□□ 0.82
TMEM260-203ENST00000539559 BFSP2Q13515 415 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 NR1D2Q14995 579 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 ZNF420Q8TAQ5 688 aaPredicted RBP20.17■□□□□ 0.82
TMEM260-203ENST00000539559 SNX19Q92543 992 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.17■□□□□ 0.82
TMEM260-203ENST00000539559 CSF3RQ99062 836 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 SLC25A51Q9H1U9 297 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 SYNCRIPO60506 623 aaKnown RBP20.17■□□□□ 0.82
TMEM260-203ENST00000539559 GPIP06744 558 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 KCNK10P57789 538 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 BEX3Q00994 111 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 SREBF2Q12772 1141 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 ITGADQ13349 1161 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 UGT3A1Q6NUS8 523 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 BTLAQ7Z6A9 289 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 IMP4Q96G21 291 aaKnown RBP20.17■□□□□ 0.82
TMEM260-203ENST00000539559 KATNAL1Q9BW62 490 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 CD320Q9NPF0 282 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 BRCA2P51587 3418 aa20.17■□□□□ 0.82
TMEM260-203ENST00000539559 CNTN5O94779 1100 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 CCNA2P20248 432 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 IL12AP29459 219 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 ZFP36L2P47974 494 aaKnown RBP20.16■□□□□ 0.82
TMEM260-203ENST00000539559 ADAM17P78536 824 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 ADARB1P78563 741 aaKnown RBP20.16■□□□□ 0.82
TMEM260-203ENST00000539559 CLCQ05315 142 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 CRHR2Q13324 411 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 MANEALQ5VSG8 457 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 SDHAF4Q5VUM1 108 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 GRAMD4Q6IC98 578 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 SLC2A7Q6PXP3 512 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 PSMG2Q969U7 264 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 GLT1D1Q96MS3 346 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 LHPPQ9H008 270 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 AGO3Q9H9G7 860 aaKnown RBP20.16■□□□□ 0.82
TMEM260-203ENST00000539559 TRNAU1APQ9NX07 287 aaKnown RBP20.16■□□□□ 0.82
TMEM260-203ENST00000539559 CDH9Q9ULB4 789 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 PTCH2Q9Y6C5 1203 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 UBA6A0AVT1 1052 aaPredicted RBP20.16■□□□□ 0.82
TMEM260-203ENST00000539559 SNAP91O60641 907 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 CBFA2T3O75081 653 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 IGLV3-25P01717 112 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 ALBP02768 609 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 SLC2A3P11169 496 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 PORP16435 677 aaPredicted RBP20.16■□□□□ 0.82
TMEM260-203ENST00000539559 ZNF37AP17032 561 aaPredicted RBP20.16■□□□□ 0.82
TMEM260-203ENST00000539559 MAGEA8P43361 318 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 SELPLGQ14242 412 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 GALNT3Q14435 633 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 IMPG1Q17R60 797 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 CCNYL2Q5T2Q4 361 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 TIGD7Q6NT04 549 aaPredicted RBP20.16■□□□□ 0.82
TMEM260-203ENST00000539559 RTL3Q8N8U3 475 aaKnown RBP20.16■□□□□ 0.82
TMEM260-203ENST00000539559 PDZD8Q8NEN9 1154 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 NANOGQ9H9S0 305 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 NMUR1Q9HB89 426 aa20.16■□□□□ 0.82
TMEM260-203ENST00000539559 A0A1W2PP18 115 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 LDB2O43679 373 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 NOL3O60936 208 aaKnown RBP20.15■□□□□ 0.82
TMEM260-203ENST00000539559 CYBBP04839 570 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 FDXRP22570 491 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 HLCSP50747 726 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 ZNF135P52742 658 aaPredicted RBP20.15■□□□□ 0.82
TMEM260-203ENST00000539559 CYP2A13Q16696 494 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 ALFQ53S48 1182 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 USP51Q70EK9 711 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 RAB44Q7Z6P3 723 aaPredicted RBP20.15■□□□□ 0.82
TMEM260-203ENST00000539559 CIR1Q86X95 450 aaPredicted RBP20.15■□□□□ 0.82
TMEM260-203ENST00000539559 SNX29P2Q8IUI4 249 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 HS3ST5Q8IZT8 346 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 OR13F1Q8NGS4 319 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 OR2T11Q8NH01 316 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 PPM1MQ96MI6 270 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 ATOH8Q96SQ7 321 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 MFSD1Q9H3U5 465 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 TSR3Q9UJK0 312 aaKnown RBP20.15■□□□□ 0.82
TMEM260-203ENST00000539559 CCDC162PA2VCL2 907 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 CCDC154A6NI56 674 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 F8W810 466 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 SLC7A4O43246 635 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 FGF4P08620 206 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 MTPNP58546 118 aa20.15■□□□□ 0.82
TMEM260-203ENST00000539559 SFSWAPQ12872 951 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms