RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 RAD54BQ9Y620 910 aa3.85□□□□□ -1.79
AC055720.1-201ENST00000539552 CDY1Q9Y6F8 540 aa3.85□□□□□ -1.79
AC055720.1-201ENST00000539552 TEX264Q9Y6I9 313 aa3.85□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF644Q9H582 1327 aaPredicted RBP3.85□□□□□ -1.79
AC055720.1-201ENST00000539552 PRXQ9BXM0 1461 aa3.85□□□□□ -1.79
AC055720.1-201ENST00000539552 LTN1O94822 1766 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 DSPP15924 2871 aaKnown RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 LOC102723996A0A087X1L8 192 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 XKRY2A2RUG3 117 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 DENND3A2RUS2 1198 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 SMIM30A4D0T7 59 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 CDHR4A6H8M9 788 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 C2orf78A6NCI8 922 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 LRRC72A6NJI9 287 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 A6NL46 340 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 CXorf49A8MYA2 514 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC30A4O14863 429 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 RNF113AO15541 343 aaKnown RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 SPOPO43791 374 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 GMFGO60234 142 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 CYTIPO60759 359 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 TADA2AO75478 443 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 SLCO2B1O94956 709 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 DIRAS3O95661 229 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 PDGFBP01127 241 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 KLKB1P03952 638 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 HLA-DOAP06340 250 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 MMP2P08253 660 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM86B2P0C5J1 330 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 CCDC192P0DO97 292 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 ACTN1P12814 892 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 NCF1P14598 390 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 ETS1P14921 441 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 ITGB6P18564 788 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 TRIM21P19474 475 aaKnown RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 ITGALP20701 1170 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 AHCYP23526 432 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 CD38P28907 300 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 HOXA13P31271 388 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 GNL1P36915 607 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 GSTM5P46439 218 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 NME5P56597 212 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 LOXL3P58215 753 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 CEBPZQ03701 1054 aaKnown RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 RELQ04864 619 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 SLFN5Q08AF3 891 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 MRPL49Q13405 166 aaKnown RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 FRG1Q14331 258 aaKnown RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 RRS1Q15050 365 aaKnown RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 LETM2Q2VYF4 491 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 LRRC23Q53EV4 343 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 AADACL4Q5VUY2 407 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 KIAA0930Q6ICG6 404 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 EFCAB12Q6NXP0 572 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 MSANTD2Q6P1R3 559 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 AFTPHQ6ULP2 937 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC36A4Q6YBV0 504 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 KCTD9Q7L273 389 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 KCTD20Q7Z5Y7 419 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 KLHL7Q8IXQ5 586 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 ELMOD2Q8IZ81 293 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 PDCL2Q8N4E4 241 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 ARL14Q8N4G2 192 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 DCLK2Q8N568 766 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 NHLRC2Q8NBF2 726 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 SHCBP1Q8NEM2 672 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 CADM4Q8NFZ8 388 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 NEK11Q8NG66 645 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 OR14K1Q8NGZ2 314 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 MBD3L2Q8NHZ7 208 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 ST7LQ8TDW4 575 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 RABGGTAQ92696 567 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 THRSPQ92748 146 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 TFAP2CQ92754 450 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 BCL2L2Q92843 193 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 PPP2R3CQ969Q6 453 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 RNFT2Q96EX2 444 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 LRIG1Q96JA1 1093 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 KLHL15Q96M94 604 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC46A1Q96NT5 459 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 HIST1H2AAQ96QV6 131 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 GAD1Q99259 594 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 PAFAH2Q99487 392 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 PLA2G12BQ9BX93 195 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 TEX13AQ9BXU3 409 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 NFKBIZQ9BYH8 718 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 NACAP1Q9BZK3 213 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 KATNBL1Q9H079 304 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF703Q9H7S9 590 aaPredicted RBP3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 NRDE2Q9H7Z3 1164 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 TMEM206Q9H813 350 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 VCPKMTQ9H867 229 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 COQ10BQ9H8M1 238 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 SYTL2Q9HCH5 934 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 MSL2Q9HCI7 577 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 CENPMQ9NSP4 180 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 RRP7BPQ9NSQ0 103 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 FBXO34Q9NWN3 711 aa3.84□□□□□ -1.79
AC055720.1-201ENST00000539552 OGFRQ9NZT2 677 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms