RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SLC39A1Q9NY26 324 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 PKD2L2Q9NZM6 624 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 ZNHIT2Q9UHR6 403 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 LCMT1Q9UIC8 334 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 KCNK6Q9Y257 313 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 HEMK1Q9Y5R4 338 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 USP9XQ93008 2570 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 ANKRD66B4E2M5 251 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 JCHAINP01591 159 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 SFTPCP11686 197 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 LIFP15018 202 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 KDELR1P24390 212 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 EPHA4P54764 986 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 NFATC2Q13469 925 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 GALNT3Q14435 633 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 CLCA4Q14CN2 919 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 SLC18A3Q16572 532 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 DCAF12Q5T6F0 453 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 ANKS6Q68DC2 871 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 IYDQ6PHW0 289 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 LYSMD3Q7Z3D4 306 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 ARHGAP22Q7Z5H3 698 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 SLC9B2Q86UD5 537 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 IL22RA1Q8N6P7 574 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 CCHCR1Q8TD31 782 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 EID2BQ96D98 161 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 RNF157Q96PX1 679 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 TEFMQ96QE5 360 aaKnown RBP12.38□□□□□ -0.43
VAMP1-206ENST00000538970 TRIB3Q96RU7 358 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 ADGRE3Q9BY15 652 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 CARD9Q9H257 536 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 IGSF5Q9NSI5 407 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 IFNKQ9P0W0 207 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 ADGRG1Q9Y653 693 aa12.38□□□□□ -0.43
VAMP1-206ENST00000538970 TLN1Q9Y490 2541 aaKnown RBP12.38□□□□□ -0.43
VAMP1-206ENST00000538970 KIR2DS5A0A0G2JLQ3 304 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 A0A0G2JNG1 304 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 ZNF487B1APH4 448 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 KIR2DS3K7RE56 304 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 GRID2O43424 1007 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 NUAK1O60285 661 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 RAD1O60671 282 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 TMEM253P0C7T8 217 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 F3P13726 295 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 SLC2A4P14672 509 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 PPM1FP49593 454 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-206ENST00000538970 KIR2DS5Q14953 304 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 ASTE1Q2TB18 679 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-206ENST00000538970 ZNF569Q5MCW4 686 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 SNAP47Q5SQN1 464 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 ZFYVE27Q5T4F4 411 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 SLC9A4Q6AI14 798 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 PHYKPLQ8IUZ5 450 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 CACNA2D3Q8IZS8 1091 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 SH3KBP1Q96B97 665 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 RTP4Q96DX8 246 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 BRD8Q9H0E9 1235 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 ATXN10Q9UBB4 475 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 NFKBIL1Q9UBC1 381 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-206ENST00000538970 PILRAQ9UKJ1 303 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 BSNQ9UPA5 3926 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 DOPEY2Q9Y3R5 2298 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 RELNP78509 3460 aa12.37□□□□□ -0.43
VAMP1-206ENST00000538970 LRRD1A4D1F6 860 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
VAMP1-206ENST00000538970 A8MU76 341 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 SUV39H1O43463 412 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 SNX2O60749 519 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 PPFIA2O75334 1257 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 ZNF8P17098 575 aaPredicted RBP12.36□□□□□ -0.43
VAMP1-206ENST00000538970 MAPK9P45984 424 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 CLCNKAP51800 687 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 DCDC1P59894 354 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 UBE2IP63279 158 aaKnown RBP12.36□□□□□ -0.43
VAMP1-206ENST00000538970 MC2RQ01718 297 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 MESDQ14696 234 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 FAM182AQ5T1J6 154 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 ALS2CLQ60I27 953 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 BORAQ6PGQ7 559 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 VSIG1Q86XK7 387 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 GPR26Q8NDV2 337 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 NCSTNQ92542 709 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 IMP4Q96G21 291 aaKnown RBP12.36□□□□□ -0.43
VAMP1-206ENST00000538970 OLFM3Q96PB7 478 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 DNAJC7Q99615 494 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 CTRCQ99895 268 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 ZSCAN5AQ9BUG6 496 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 CEP41Q9BYV8 373 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.36□□□□□ -0.43
VAMP1-206ENST00000538970 SPRY4Q9C004 299 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 XPO4Q9C0E2 1151 aaKnown RBP12.36□□□□□ -0.43
VAMP1-206ENST00000538970 OR2AG1Q9H205 316 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 EPB41L1Q9H4G0 881 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 ZFYVE1Q9HBF4 777 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 ARFGAP3Q9NP61 516 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 PRDM8Q9NQV8 689 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 GEMIN8Q9NWZ8 242 aaKnown RBP12.36□□□□□ -0.43
VAMP1-206ENST00000538970 HEY1Q9Y5J3 304 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms