RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 DCAF12Q5T6F0 453 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 LRRC38Q5VT99 294 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 NKAIN2Q5VXU1 208 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 CHST15Q7LFX5 561 aaPredicted RBP8.56□□□□□ -1.04
DDB1-212ENST00000538470 LYSMD3Q7Z3D4 306 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 FAM129CQ86XR2 697 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 CPNE8Q86YQ8 564 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.56□□□□□ -1.04
DDB1-212ENST00000538470 OR8K1Q8NGG5 319 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 RAPGEF5Q92565 580 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 ART4Q93070 314 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 IMP4Q96G21 291 aaKnown RBP8.56□□□□□ -1.04
DDB1-212ENST00000538470 OLFM3Q96PB7 478 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 SMIM14Q96QK8 99 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 TRIB3Q96RU7 358 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 ZPBPQ9BS86 351 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 PACSIN1Q9BY11 444 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 XPO4Q9C0E2 1151 aaKnown RBP8.56□□□□□ -1.04
DDB1-212ENST00000538470 UCK1Q9HA47 277 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 ZFYVE1Q9HBF4 777 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 MAGEE1Q9HCI5 957 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 STARD5Q9NSY2 213 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 ZNHIT6Q9NWK9 470 aaKnown RBP8.56□□□□□ -1.04
DDB1-212ENST00000538470 TBC1D29Q9UFV1 150 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 ZNHIT2Q9UHR6 403 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 CNOT6Q9ULM6 557 aaKnown RBP8.56□□□□□ -1.04
DDB1-212ENST00000538470 PLEKHM1Q9Y4G2 1056 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 HEMK1Q9Y5R4 338 aaPredicted RBP8.56□□□□□ -1.04
DDB1-212ENST00000538470 B3GALT1Q9Y5Z6 326 aa8.56□□□□□ -1.04
DDB1-212ENST00000538470 MN1Q10571 1320 aaPredicted RBP8.55□□□□□ -1.04
DDB1-212ENST00000538470 PTPN13Q12923 2485 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 C3orf70A6NLC5 250 aaPredicted RBP8.55□□□□□ -1.04
DDB1-212ENST00000538470 EFCAB7A8K855 629 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 KCNK1O00180 336 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 AGRPO00253 132 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 CAPN5O15484 640 aaPredicted RBP8.55□□□□□ -1.04
DDB1-212ENST00000538470 GRID2O43424 1007 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 SLC28A2O43868 658 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 VEGFDO43915 354 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 AKR1B10O60218 316 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 PPFIA2O75334 1257 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 JCHAINP01591 159 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 KRT1P04264 644 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 ATP1A1P05023 1023 aaKnown RBP8.55□□□□□ -1.04
DDB1-212ENST00000538470 ANKRD34CP0C6C1 535 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 UGT1A3P35503 534 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 SLC1A1P43005 524 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 ARSDP51689 593 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 AP1B1Q10567 949 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 GALNT3Q14435 633 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 MESDQ14696 234 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 ODF2Q5BJF6 829 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 IYDQ6PHW0 289 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 CEACAM20Q6UY09 585 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 NT5DC3Q86UY8 548 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 CACNA2D3Q8IZS8 1091 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 TRAM1L1Q8N609 369 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 IL22RA1Q8N6P7 574 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 CNTD1Q8N815 330 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 BMPERQ8N8U9 685 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 EXD3Q8N9H8 876 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 EXTL1Q92935 676 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 NKD1Q969G9 470 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 TADA1Q96BN2 335 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 CATSPER2Q96P56 530 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 TIMM29Q9BSF4 260 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 EFHD1Q9BUP0 239 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 MAK16Q9BXY0 300 aaKnown RBP8.55□□□□□ -1.04
DDB1-212ENST00000538470 FAM117AQ9C073 453 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 SLC25A51Q9H1U9 297 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 ADNPQ9H2P0 1102 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 ABHD10Q9NUJ1 306 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 POT1Q9NUX5 634 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 SLC39A1Q9NY26 324 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 DDX56Q9NY93 547 aaKnown RBP8.55□□□□□ -1.04
DDB1-212ENST00000538470 TMEM9Q9P0T7 183 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 KCNK6Q9Y257 313 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 ZNF711Q9Y462 761 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 HEY1Q9Y5J3 304 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 PCYT1BQ9Y5K3 369 aaPredicted RBP8.55□□□□□ -1.04
DDB1-212ENST00000538470 ADGRG1Q9Y653 693 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 BSNQ9UPA5 3926 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 BOD1L1Q8NFC6 3051 aa8.55□□□□□ -1.04
DDB1-212ENST00000538470 A0A0A6YYK5 440 aaPredicted RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 ZNF891A8MT65 544 aaPredicted RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 CHUKO15111 745 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 MTSS1O43312 755 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 RAD1O60671 282 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 MFAP3LO75121 409 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 SLC25A14O95258 325 aaPredicted RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 NDST3O95803 873 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 EML2O95834 649 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 WT1P19544 449 aaPredicted RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 PPM1FP49593 454 aaPredicted RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 UBE2IP63279 158 aaKnown RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 MC2RQ01718 297 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 CDK18Q07002 472 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 NFATC3Q12968 1075 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 NFATC2Q13469 925 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 MAP7Q14244 749 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms