RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SCML4Q8N228 414 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 CLSTN3Q9BQT9 956 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 TRIM4Q9C037 500 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 MRM3Q9HC36 420 aaKnown RBP8.65□□□□□ -1.02
UBE3B-208ENST00000538070 SYTL2Q9HCH5 934 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 CRLS1Q9UJA2 301 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 USP22Q9UPT9 525 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 YIPF1Q9Y548 306 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 C15orf38-AP3S2A0A0A6YYH1 394 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 DRGXA6NNA5 263 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 WASH4PA8MWX3 477 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 MTX2O75431 263 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 CLDN7O95471 211 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 HSPA7P48741 367 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 GPNMBQ14956 572 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 NR6A1Q15406 480 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 MAPRE2Q15555 327 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 SLC44A4Q53GD3 710 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 FAM26DQ5JW98 314 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 KRT80Q6KB66 452 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 AFTPHQ6ULP2 937 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 OTOP2Q7RTS6 562 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 ARPINQ7Z6K5 226 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 RETREG3Q86VR2 466 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 DHFR2Q86XF0 187 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 MIER2Q8N344 545 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 HMGCLL1Q8TB92 370 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 GRIN3AQ8TCU5 1115 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF296Q8WUU4 475 aaPredicted RBP8.65□□□□□ -1.03
UBE3B-208ENST00000538070 CANT1Q8WVQ1 401 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 ANKRD27Q96NW4 1050 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 SLC25A23Q9BV35 468 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 CIPCQ9C0C6 399 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 SPAG4Q9NPE6 437 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 SUN2Q9UH99 717 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 PRPF19Q9UMS4 504 aaKnown RBP8.65□□□□□ -1.03
UBE3B-208ENST00000538070 NDUFAF1Q9Y375 327 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 PCDHGA7Q9Y5G6 932 aa8.65□□□□□ -1.03
UBE3B-208ENST00000538070 A0A1B0GTW7 788 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 A0A1B0GVM2 712 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PCNAP12004 261 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 FDXRP22570 491 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PRDX6P30041 224 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 UFM1P61960 85 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 ARHGEF7Q14155 803 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 FRG1Q14331 258 aaKnown RBP8.64□□□□□ -1.03
UBE3B-208ENST00000538070 LRRC43Q8N309 656 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 NAT16Q8N8M0 369 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 FAR2Q96K12 515 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PPM1MQ96MI6 270 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PSKH2Q96QS6 385 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 CLPBQ9H078 707 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 COQ10BQ9H8M1 238 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PFDN4Q9NQP4 134 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 SLAMF8Q9P0V8 285 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 THEGQ9P2T0 379 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 CLEC4EQ9ULY5 219 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 GON4LQ3T8J9 2241 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 IGLV3-10A0A075B6K4 115 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PFDN6O15212 129 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 S100BP04271 92 aaPredicted RBP8.64□□□□□ -1.03
UBE3B-208ENST00000538070 LBPP18428 481 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 CST5P28325 142 aaPredicted RBP8.64□□□□□ -1.03
UBE3B-208ENST00000538070 KPNA1P52294 538 aaPredicted RBP8.64□□□□□ -1.03
UBE3B-208ENST00000538070 DGKQP52824 942 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 KCNK10P57789 538 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 ARF5P84085 180 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PPP1R8Q12972 351 aaKnown RBP8.64□□□□□ -1.03
UBE3B-208ENST00000538070 TRIM25Q14258 630 aaKnown RBP8.64□□□□□ -1.03
UBE3B-208ENST00000538070 TBCELQ5QJ74 424 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 ARTNQ5T4W7 220 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 HS6ST3Q8IZP7 471 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PCYOX1LQ8NBM8 494 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 GATA6Q92908 595 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 C17orf80Q9BSJ5 609 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 TDRD1Q9BXT4 1180 aaKnown RBP8.64□□□□□ -1.03
UBE3B-208ENST00000538070 CFAP97Q9P2B7 532 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 POLG2Q9UHN1 485 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 VPS51Q9UID3 782 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 SH3BP1Q9Y3L3 701 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 SQORQ9Y6N5 450 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 A0A1W2PRU2 124 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PRAMEF1O95521 474 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 CLIC3O95833 236 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 PRLP01236 227 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 URODP06132 367 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 MTHFD2P13995 350 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 CAPN3P20807 821 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 HMOX2P30519 316 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 DNAJB13P59910 316 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 CDKL1Q00532 357 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF697Q5TEC3 545 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 ZBTB49Q6ZSB9 765 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 SYVN1Q86TM6 617 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 TEX26Q8N6G2 289 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF366Q8N895 744 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 GFM2Q969S9 779 aaKnown RBP8.64□□□□□ -1.03
UBE3B-208ENST00000538070 TEX37Q96LM6 180 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 CORO1BQ9BR76 489 aa8.64□□□□□ -1.03
UBE3B-208ENST00000538070 TUBB1Q9H4B7 451 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms