RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 QKIQ96PU8 341 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRKDC-207ENST00000536483 SMIM14Q96QK8 99 aa12.36□□□□□ -0.43
PRKDC-207ENST00000536483 CMKLR1Q99788 373 aa12.36□□□□□ -0.43
PRKDC-207ENST00000536483 OSBPL8Q9BZF1 889 aa12.36□□□□□ -0.43
PRKDC-207ENST00000536483 FAM117AQ9C073 453 aa12.36□□□□□ -0.43
PRKDC-207ENST00000536483 SEMA6CQ9H3T2 930 aa12.36□□□□□ -0.43
PRKDC-207ENST00000536483 FOXJ2Q9P0K8 574 aa12.36□□□□□ -0.43
PRKDC-207ENST00000536483 SEPT10Q9P0V9 454 aa12.36□□□□□ -0.43
PRKDC-207ENST00000536483 CNOT6Q9ULM6 557 aaKnown RBP12.36□□□□□ -0.43
PRKDC-207ENST00000536483 HEMK1Q9Y5R4 338 aaPredicted RBP12.36□□□□□ -0.43
PRKDC-207ENST00000536483 SPTA1P02549 2419 aa12.36□□□□□ -0.43
PRKDC-207ENST00000536483 HECTD1Q9ULT8 2610 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 MIF4GDA9UHW6 222 aaKnown RBP12.35□□□□□ -0.43
PRKDC-207ENST00000536483 C9orf172C9J069 976 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 B4GAT1O43505 415 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 NUDT21O43809 227 aaKnown RBP12.35□□□□□ -0.43
PRKDC-207ENST00000536483 NDST3O95803 873 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 ITGB2P05107 769 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 WT1P19544 449 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-207ENST00000536483 GPR1P46091 355 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 GSDMDP57764 484 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 NFKB2Q00653 900 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 B4GALNT1Q00973 533 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 KIF5AQ12840 1032 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 MANEAQ5SRI9 462 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 PHF19Q5T6S3 580 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 PDPK2PQ6A1A2 396 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 RAET1GQ6H3X3 334 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 KDELC1Q6UW63 502 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 ZNF662Q6ZS27 426 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 NRROSQ86YC3 692 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 KLHDC8BQ8IXV7 354 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 SYCE1Q8N0S2 351 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 ALG3Q92685 438 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 SCAMP4Q969E2 229 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 TMEM159Q96B96 161 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 HERPUD2Q9BSE4 406 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 TRIM4Q9C037 500 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 TRABDQ9H4I3 376 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 SUDS3Q9H7L9 328 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-207ENST00000536483 ZFYVE1Q9HBF4 777 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 RDH14Q9HBH5 336 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 RAD18Q9NS91 495 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 SPATS2LQ9NUQ6 558 aaKnown RBP12.35□□□□□ -0.43
PRKDC-207ENST00000536483 PKD2L2Q9NZM6 624 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 VPS18Q9P253 973 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 FAM153AQ9UHL3 310 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 TTLL3Q9Y4R7 772 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 PCDHB11Q9Y5F2 797 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 SCN8AQ9UQD0 1980 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 MAST4O15021 2626 aa12.35□□□□□ -0.43
PRKDC-207ENST00000536483 A0A0U1RQS6 177 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 C1orf232A0A0U1RR37 186 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 ARHGAP6O43182 974 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 MT-CYBP00156 380 aaPredicted RBP12.34□□□□□ -0.43
PRKDC-207ENST00000536483 FAM87AP0C7U9 286 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 PYGMP11217 842 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 ITGB6P18564 788 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 CETN2P41208 172 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 MAZP56270 477 aaKnown RBP12.34□□□□□ -0.43
PRKDC-207ENST00000536483 OR1D5P58170 312 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 CYP4F2P78329 520 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 PEX6Q13608 980 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 NR1D2Q14995 579 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 C16orf72Q14CZ0 275 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 AMZ1Q400G9 498 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 MAP9Q49MG5 647 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 KAZNQ674X7 775 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 DENND2CQ68D51 928 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 XKR5Q6UX68 686 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 DTX1Q86Y01 620 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 ZNF567Q8N184 647 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 SPATA22Q8NHS9 363 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 HES6Q96HZ4 224 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 AGAP2Q99490 1192 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 RIOK2Q9BVS4 552 aaKnown RBP12.34□□□□□ -0.43
PRKDC-207ENST00000536483 CEP41Q9BYV8 373 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 FAM83DQ9H4H8 585 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 CARS2Q9HA77 564 aaKnown RBP12.34□□□□□ -0.43
PRKDC-207ENST00000536483 STARD5Q9NSY2 213 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 SUFUQ9UMX1 484 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 ADGRG1Q9Y653 693 aa12.34□□□□□ -0.43
PRKDC-207ENST00000536483 ARHGEF17Q96PE2 2063 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-207ENST00000536483 TLN1Q9Y490 2541 aaKnown RBP12.33□□□□□ -0.44
PRKDC-207ENST00000536483 ESPNB1AK53 854 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 GPR89AB7ZAQ6 455 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 TJP3O95049 919 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 CPNE6O95741 557 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 FGF1P05230 155 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 GPR89BP0CG08 455 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 CCL4P13236 92 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 ALDH4A1P30038 563 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 HMGCLP35914 325 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 CSRP3P50461 194 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 KLF1Q13351 362 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-207ENST00000536483 MPP3Q13368 585 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 LRP8Q14114 963 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms