RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CACNB2Q08289 660 aaPredicted RBP17.85■□□□□ 0.45
RAB40C-203ENST00000535977 EFEMP1Q12805 493 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 TMEM198Q66K66 360 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 ZNF354CQ86Y25 554 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 TMCO5AQ8N6Q1 288 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 TERB1Q8NA31 727 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 OR6P1Q8NGX9 317 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 SPPL2BQ8TCT7 592 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 L3HYPDHQ96EM0 354 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 C1orf50Q9BV19 199 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 NOL11Q9H8H0 719 aaKnown RBP17.85■□□□□ 0.45
RAB40C-203ENST00000535977 POPDC3Q9HBV1 291 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 ACSS2Q9NR19 701 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 CENPFP49454 3210 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 DOCK4Q8N1I0 1966 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 MYLKQ15746 1914 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 TCAF2A6NFQ2 919 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 RSL1D1O76021 490 aaKnown RBP17.85■□□□□ 0.45
RAB40C-203ENST00000535977 FGF1P05230 155 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 MAP4P27816 1152 aaKnown RBP17.85■□□□□ 0.45
RAB40C-203ENST00000535977 TTKP33981 857 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 NFKB2Q00653 900 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 SMARCB1Q12824 385 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 SELENBP1Q13228 472 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 SERINC3Q13530 473 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 ALFQ53S48 1182 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 SIRPB2Q5JXA9 342 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 FBXL22Q6P050 247 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 CUZD1Q86UP6 607 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 ARRDC2Q8TBH0 407 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 FBXO32Q969P5 355 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 TOP1MTQ969P6 601 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 HDAC10Q969S8 669 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 PSMG2Q969U7 264 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 FEM1CQ96JP0 617 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 ZNF599Q96NL3 588 aa17.85■□□□□ 0.45
RAB40C-203ENST00000535977 POLR1EQ9GZS1 481 aaKnown RBP17.85■□□□□ 0.45
RAB40C-203ENST00000535977 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.85■□□□□ 0.45
RAB40C-203ENST00000535977 UXTQ9UBK9 157 aaPredicted RBP17.85■□□□□ 0.45
RAB40C-203ENST00000535977 AURKAO14965 403 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 GPC4O75487 556 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 MYO1DO94832 1006 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 WISP3O95389 354 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-203ENST00000535977 ETFBP38117 255 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 ATP4BP51164 291 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 LDLRAP1Q5SW96 308 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 HMBOX1Q6NT76 420 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 MRNIPQ6NTE8 343 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 ZBTB49Q6ZSB9 765 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 RNF135Q8IUD6 432 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 Q8N9G6 341 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-203ENST00000535977 TNIP2Q8NFZ5 429 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 NANOGQ9H9S0 305 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 MARCH2Q9P0N8 246 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 GABRQQ9UN88 632 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 TNFRSF10AO00220 468 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 TRIM38O00635 465 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 SOCS2O14508 198 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 UBDO15205 165 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 CNTN5O94779 1100 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 IGLV3-27P01718 113 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 JUNP05412 331 aaKnown RBP17.84■□□□□ 0.45
RAB40C-203ENST00000535977 CCNA2P20248 432 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 IDUAP35475 653 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 HNRNPFP52597 415 aaKnown RBP17.84■□□□□ 0.45
RAB40C-203ENST00000535977 MAXP61244 160 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 CTXN3Q4LDR2 81 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 ZNF789Q5FWF6 425 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 VARS2Q5ST30 1063 aaKnown RBP17.84■□□□□ 0.45
RAB40C-203ENST00000535977 TMA16Q96EY4 203 aaKnown RBP17.84■□□□□ 0.45
RAB40C-203ENST00000535977 KLHL5Q96PQ7 755 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 IFT52Q9Y366 437 aa17.84■□□□□ 0.45
RAB40C-203ENST00000535977 MOXD2PA6NHM9 499 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 NOL3O60936 208 aaKnown RBP17.83■□□□□ 0.45
RAB40C-203ENST00000535977 GLP2RO95838 553 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 BCL10O95999 233 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 HNRNPLP14866 589 aaKnown RBP eCLIP17.83■□□□□ 0.45
RAB40C-203ENST00000535977 TPTEP56180 551 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 MRPL58Q14197 206 aaKnown RBP17.83■□□□□ 0.45
RAB40C-203ENST00000535977 CLLU1OSQ5K130 101 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 FRA10AC1Q70Z53 315 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 RTN4RL1Q86UN2 441 aaPredicted RBP17.83■□□□□ 0.45
RAB40C-203ENST00000535977 SLCO4A1Q96BD0 722 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 SPATA17Q96L03 361 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 PCDHAC1Q9H158 963 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 TRMT13Q9NUP7 481 aaKnown RBP17.83■□□□□ 0.45
RAB40C-203ENST00000535977 SMOXQ9NWM0 555 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 SEPT3Q9UH03 358 aa17.83■□□□□ 0.45
RAB40C-203ENST00000535977 TRIM64A6NGJ6 449 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 LDB2O43679 373 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 JRKO75564 520 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 CLPXO76031 633 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 ATXN1LP0C7T5 689 aaKnown RBP17.83■□□□□ 0.44
RAB40C-203ENST00000535977 IFITM2Q01629 132 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 E2F2Q14209 437 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 AGAP7PQ5VUJ5 663 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 SDHAF4Q5VUM1 108 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 ZNF280DQ6N043 979 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 FAM117BQ6P1L5 589 aa17.83■□□□□ 0.44
RAB40C-203ENST00000535977 KCTD8Q6ZWB6 473 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms