RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 PTK2BQ14289 1009 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 SLC29A2Q14542 456 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 PTPRCAPQ14761 206 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 HSP90AA5PQ58FG0 334 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 ZRANB3Q5FWF4 1079 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 TEDDM1Q5T9Z0 273 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 LGSNQ5TDP6 509 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 RAET1GQ6H3X3 334 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 CES3Q6UWW8 571 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 PACS1Q6VY07 963 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 KYAT3Q6YP21 454 aaKnown RBP16.11■□□□□ 0.17
VAMP1-205ENST00000535927 PTAR1Q7Z6K3 402 aaPredicted RBP16.11■□□□□ 0.17
VAMP1-205ENST00000535927 ABI3BPQ7Z7G0 1075 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 PHYKPLQ8IUZ5 450 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 MFSD2AQ8NA29 543 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 C2CD4AQ8NCU7 369 aaPredicted RBP16.11■□□□□ 0.17
VAMP1-205ENST00000535927 DDHD1Q8NEL9 900 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 FBF1Q8TES7 1133 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 UBLCP1Q8WVY7 318 aaPredicted RBP16.11■□□□□ 0.17
VAMP1-205ENST00000535927 COX14Q96I36 57 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 COPS8Q99627 209 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 WDR26Q9H7D7 661 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 TRIM39Q9HCM9 518 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 SLC24A2Q9UI40 661 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 RABGEF1Q9UJ41 708 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 FBXO5Q9UKT4 447 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 COQ6Q9Y2Z9 468 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 IKBKGQ9Y6K9 419 aa16.11■□□□□ 0.17
VAMP1-205ENST00000535927 IGLV3-16A0A075B6K0 115 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 A6NNZ2 444 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 CACNB4O00305 520 aaPredicted RBP16.1■□□□□ 0.17
VAMP1-205ENST00000535927 HRO43593 1189 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 KCNJ13O60928 360 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 NDUFS3O75489 264 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 AP2A2O94973 939 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 SLC25A14O95258 325 aaPredicted RBP16.1■□□□□ 0.17
VAMP1-205ENST00000535927 RPS3P23396 243 aaKnown RBP eCLIP16.1■□□□□ 0.17
VAMP1-205ENST00000535927 ACRV1P26436 265 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 CNTFP26441 200 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 MAT2AP31153 395 aaKnown RBP16.1■□□□□ 0.17
VAMP1-205ENST00000535927 HSD17B3P37058 310 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 SERPINB9P50453 376 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 KIAA1024LP59773 190 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 PFN3P60673 137 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 INPP5AQ14642 412 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 IRF4Q15306 451 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 PLK5Q496M5 336 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 ATP13A5Q4VNC0 1218 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 GRTP1Q5TC63 336 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 ALS2CLQ60I27 953 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 CEP68Q76N32 757 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 MARK2Q7KZI7 788 aaKnown RBP16.1■□□□□ 0.17
VAMP1-205ENST00000535927 TAOK1Q7L7X3 1001 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 TAS2R42Q7RTR8 314 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 GSPT2Q8IYD1 628 aaKnown RBP16.1■□□□□ 0.17
VAMP1-205ENST00000535927 RBFAQ8N0V3 343 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 FAM160A2Q8N612 972 aaPredicted RBP16.1■□□□□ 0.17
VAMP1-205ENST00000535927 DCUN1D1Q96GG9 259 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 SERAC1Q96JX3 654 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 APOOQ9BUR5 198 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 TMEM109Q9BVC6 243 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 SUDS3Q9H7L9 328 aaPredicted RBP16.1■□□□□ 0.17
VAMP1-205ENST00000535927 ZNF180Q9UJW8 692 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 PCDHB1Q9Y5F3 818 aa16.1■□□□□ 0.17
VAMP1-205ENST00000535927 DNMT3AQ9Y6K1 912 aaPredicted RBP16.1■□□□□ 0.17
VAMP1-205ENST00000535927 GON4LQ3T8J9 2241 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 A0A0U1RQS6 177 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 ERVK-10P10266 1014 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 MYCLP1P12525 358 aaPredicted RBP16.09■□□□□ 0.17
VAMP1-205ENST00000535927 CD9P21926 228 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 GP5P40197 560 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 CDK3Q00526 305 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 DNAJC3Q13217 504 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 TEAD4Q15561 434 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 KBTBD12Q3ZCT8 623 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 LYSMD4Q5XG99 296 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 ZNF470Q6ECI4 717 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 RFLNAQ6ZTI6 216 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 SERPINA9Q86WD7 417 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 TDRPQ86YL5 185 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 RIBC1Q8N443 379 aaPredicted RBP16.09■□□□□ 0.17
VAMP1-205ENST00000535927 CEP76Q8TAP6 659 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 HSPA12BQ96MM6 686 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 ORAI3Q9BRQ5 295 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 TSSK1BQ9BXA7 367 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 IARS2Q9NSE4 1012 aaKnown RBP16.09■□□□□ 0.17
VAMP1-205ENST00000535927 CD84Q9UIB8 345 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 CNOT6Q9ULM6 557 aaKnown RBP16.09■□□□□ 0.17
VAMP1-205ENST00000535927 GPR34Q9UPC5 381 aa16.09■□□□□ 0.17
VAMP1-205ENST00000535927 EXOC1LA0A1B0GW35 172 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 CCDC78A2IDD5 438 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 FADS2P1A8MWK0 482 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 DYNC1I1O14576 645 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 PRMT5O14744 637 aaPredicted RBP16.08■□□□□ 0.16
VAMP1-205ENST00000535927 S1PR4O95977 384 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 SOD1P00441 154 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 ESR1P03372 595 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 MSH3P20585 1137 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 BCKDHBP21953 392 aa16.08■□□□□ 0.16
VAMP1-205ENST00000535927 CD38P28907 300 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms