RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 LRRC1Q9BTT6 524 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 KIFC1Q9BW19 673 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 DPH5Q9H2P9 285 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 CYP4F12Q9HCS2 524 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 UCKL1Q9NWZ5 548 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 ANAPC5Q9UJX4 755 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 SLC17A4Q9Y2C5 497 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 PCDHGB2Q9Y5G2 931 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 DGKBQ9Y6T7 804 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 LRP4O75096 1905 aa11.96□□□□□ -0.5
CHD4-203ENST00000535717 TDRD6O60522 2096 aaKnown RBP11.95□□□□□ -0.5
CHD4-203ENST00000535717 PRSS38A1L453 326 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 CCDC162PA2VCL2 907 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 CTAGE15A4D2H0 777 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 SDR42E2A6NKP2 422 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 SCAMP1O15126 338 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 YKT6O15498 198 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 PCDHGA12O60330 932 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 PIAS2O75928 621 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 RASGRP1O95267 797 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 ASMTLO95671 621 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 CTAGE8P0CG41 777 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 DGKAP23743 735 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 NMBRP28336 390 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 MC4RP32245 332 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 HNRNPKP61978 463 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHD4-203ENST00000535717 SLC14A1Q13336 389 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 NFATC2Q13469 925 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 ITGA9Q13797 1035 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 MSS51Q4VC12 460 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 KHDC1Q4VXA5 237 aaKnown RBP11.95□□□□□ -0.5
CHD4-203ENST00000535717 FNBP1LQ5T0N5 605 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 C8orf74Q6P047 294 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 CES3Q6UWW8 571 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 DBX2Q6ZNG2 339 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 CTAGE6Q86UF2 777 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 PHYKPLQ8IUZ5 450 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 CTAGE4Q8IX94 777 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 SLC25A45Q8N413 288 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 CEP112Q8N8E3 955 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 PEX13Q92968 403 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 HDAC10Q969S8 669 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 SCARF2Q96GP6 870 aaPredicted RBP11.95□□□□□ -0.5
CHD4-203ENST00000535717 SIGLEC10Q96LC7 697 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 PWWP2AQ96N64 755 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 LRRC61Q9BV99 259 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 CARD6Q9BX69 1037 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 SLC13A1Q9BZW2 595 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 FAM96AQ9H5X1 160 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 ASB8Q9H765 288 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 MRM3Q9HC36 420 aaKnown RBP11.95□□□□□ -0.5
CHD4-203ENST00000535717 TRIM39Q9HCM9 518 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 TREX1Q9NSU2 369 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 SMOXQ9NWM0 555 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 GRHL1Q9NZI5 618 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 VPS18Q9P253 973 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 ATXN10Q9UBB4 475 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 APOBEC3BQ9UH17 382 aaKnown RBP11.95□□□□□ -0.5
CHD4-203ENST00000535717 MOSPD1Q9UJG1 213 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 SUFUQ9UMX1 484 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 SOX13Q9UN79 622 aa11.95□□□□□ -0.5
CHD4-203ENST00000535717 PLXNB3Q9ULL4 1909 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 OR51F1A6NGY5 319 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 AGAP14A8MT82 685 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 H3BM21 787 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 SMAPO00193 183 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 MTX2O75431 263 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 TNFP01375 233 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 IVLP07476 585 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 CELA2BP08218 269 aaPredicted RBP11.94□□□□□ -0.5
CHD4-203ENST00000535717 PRSS56P0CW18 603 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 ITGALP20701 1170 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 GNPDA1P46926 289 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 CDKN1CP49918 316 aaPredicted RBP11.94□□□□□ -0.5
CHD4-203ENST00000535717 BLKP51451 505 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 SLC7A5Q01650 507 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 C1orf61Q13536 156 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 TCEA2Q15560 299 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 TRADDQ15628 312 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 RSPO4Q2I0M5 234 aaPredicted RBP11.94□□□□□ -0.5
CHD4-203ENST00000535717 PRRT3Q5FWE3 981 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 GPRC6AQ5T6X5 926 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 ARMC3Q5W041 872 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 CASC4Q6P4E1 433 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 MARK2Q7KZI7 788 aaKnown RBP11.94□□□□□ -0.5
CHD4-203ENST00000535717 SNX20Q7Z614 316 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 ADGRG6Q86SQ4 1221 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 PIANPQ8IYJ0 282 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 ZNF548Q8NEK5 533 aaPredicted RBP11.94□□□□□ -0.5
CHD4-203ENST00000535717 DDHD1Q8NEL9 900 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 GDAP1Q8TB36 358 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 LMX1AQ8TE12 382 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 MFSD3Q96ES6 412 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 TRIM56Q9BRZ2 755 aaKnown RBP11.94□□□□□ -0.5
CHD4-203ENST00000535717 CLPBQ9H078 707 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 RAB17Q9H0T7 212 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 OR2AG1Q9H205 316 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 CARS2Q9HA77 564 aaKnown RBP11.94□□□□□ -0.5
CHD4-203ENST00000535717 SAMD15Q9P1V8 674 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 WHRNQ9P202 907 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms