RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 KCNK1O00180 336 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 GOLGA6DP0CG33 693 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 CA4P22748 312 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 CD1CP29017 333 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 CD86P42081 329 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 SLC1A1P43005 524 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 FASLGP48023 281 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 EPHB1P54762 984 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 OR1D5P58170 312 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 PEX6Q13608 980 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 SLC14A2Q15849 920 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 FAM182AQ5T1J6 154 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 SLC30A9Q6PML9 568 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 NPNTQ6UXI9 565 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 TRIM74Q86UV6 250 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 CCNYQ8ND76 341 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 LPCAT1Q8NF37 534 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 MIB2Q96AX9 1013 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 IMP4Q96G21 291 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 CCDC42Q96M95 316 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 OR2M4Q96R27 311 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 MLPHQ9BV36 600 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 RIOK2Q9BVS4 552 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 CDH19Q9H159 772 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 SEMA6CQ9H3T2 930 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 ZNHIT6Q9NWK9 470 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 GOLGA6AQ9NYA3 693 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 VPS18Q9P253 973 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 OAS3Q9Y6K5 1087 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 RP1L1Q8IWN7 2480 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 C1orf232A0A0U1RR37 186 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 A1L4Q6 167 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 LRRD1A4D1F6 860 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 C9orf172C9J069 976 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 APOL1O14791 398 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 CPNE6O95741 557 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 ZFXP17010 805 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 CD82P27701 267 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 ACTR1BP42025 376 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 HADHBP55084 474 aaKnown RBP9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 ACTR1AP61163 376 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 LRP8Q14114 963 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 C16orf72Q14CZ0 275 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 TEX44Q53QW1 395 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 FHL5Q5TD97 284 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 TMEM164Q5U3C3 297 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 MFSD7Q6UXD7 560 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 TMC3Q7Z5M5 1100 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 NT5DC3Q86UY8 548 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 PIM3Q86V86 326 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 SFRP1Q8N474 314 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 IL22RA1Q8N6P7 574 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 PHF12Q96QT6 1004 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 CMKLR1Q99788 373 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 NUDT22Q9BRQ3 303 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 BRD8Q9H0E9 1235 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 SLC25A51Q9H1U9 297 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 TSPY26PQ9H489 355 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 SUDS3Q9H7L9 328 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 RMI1Q9H9A7 625 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 RDH14Q9HBH5 336 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 MAGEE1Q9HCI5 957 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 DDX56Q9NY93 547 aaKnown RBP9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 PDP2Q9P2J9 529 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 NFKBIL1Q9UBC1 381 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 TTLL3Q9Y4R7 772 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 HEY1Q9Y5J3 304 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 ADGRG1Q9Y653 693 aa9.97□□□□□ -0.81
CLSTN3-203ENST00000534830 CENPEQ02224 2701 aa9.96□□□□□ -0.81
CLSTN3-203ENST00000534830 IGHV1OR21-1A0A087WYE8 117 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 IGHV5-10-1A0A0J9YXX1 117 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 A6NCN8 305 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 RHPN2P1A8MT19 583 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 AKR1B15C9JRZ8 316 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 STMND1H3BQB6 276 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 HGSO14964 777 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 INPP4BO15327 924 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 LCA5LO95447 670 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 EML2O95834 649 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 ATP1A1P05023 1023 aaKnown RBP9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 TPM1P09493 284 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 COMTP21964 271 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 ALDH4A1P30038 563 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 CDKN2BP42772 138 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 CD97P48960 835 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 ATP1A2P50993 1020 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 ARSDP51689 593 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 CLCNKAP51800 687 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 LIMK2P53671 638 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 MLLT10P55197 1068 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 DCDC1P59894 354 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 AP1B1Q10567 949 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 PDK1Q15118 436 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 PRKD1Q15139 912 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 ZFYVE27Q5T4F4 411 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 PHF19Q5T6S3 580 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 ZNF787Q6DD87 383 aa9.96□□□□□ -0.82
CLSTN3-203ENST00000534830 DOK6Q6PKX4 331 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms