RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 PGM1P36871 562 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 RPL3P39023 403 aaKnown RBP3.54□□□□□ -1.84
USP48-215ENST00000534705 MAPK9P45984 424 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 CXCR3P49682 368 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 BNC1Q01954 994 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 AIMP1Q12904 312 aaKnown RBP3.54□□□□□ -1.84
USP48-215ENST00000534705 TRAF3Q13114 568 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 TRPC3Q13507 836 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 CAPSQ13938 189 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 TWISTNBQ3B726 338 aaPredicted RBP3.54□□□□□ -1.84
USP48-215ENST00000534705 FAM133BQ5BKY9 247 aaKnown RBP3.54□□□□□ -1.84
USP48-215ENST00000534705 C9orf57Q5W0N0 161 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 OLFM4Q6UX06 510 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 KIF6Q6ZMV9 814 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 NR2C2APQ86WQ0 139 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 NBPF5PQ86XG9 351 aaPredicted RBP3.54□□□□□ -1.84
USP48-215ENST00000534705 RTP4Q96DX8 246 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 PPM1MQ96MI6 270 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 LRFN5Q96NI6 719 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 FIZ1Q96SL8 496 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 PANK2Q9BZ23 570 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 RSPH9Q9H1X1 276 aaPredicted RBP3.54□□□□□ -1.84
USP48-215ENST00000534705 UNC45AQ9H3U1 944 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 CYSLTR2Q9NS75 346 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 HYPKQ9NX55 129 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 CLIC5Q9NZA1 410 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 IL1RAPL1Q9NZN1 696 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 OR6C3Q9NZP0 311 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 PEMTQ9UBM1 199 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 SLC25A10Q9UBX3 287 aaPredicted RBP3.54□□□□□ -1.84
USP48-215ENST00000534705 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.54□□□□□ -1.84
USP48-215ENST00000534705 CARD8Q9Y2G2 431 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 LRRFIP2Q9Y608 721 aaKnown RBP3.54□□□□□ -1.84
USP48-215ENST00000534705 PTPRFP10586 1907 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 MYH8P13535 1937 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 ATAD5Q96QE3 1844 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 ABCC4O15439 1325 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 THSD7BQ9C0I4 1608 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 IGLV5-37A0A075B6J1 123 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 A0A1B0GUV1 79 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 TYW5A2RUC4 315 aaKnown RBP3.53□□□□□ -1.84
USP48-215ENST00000534705 LINC01553A4QN01 128 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 HSPB2A8KAH6 182 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 KLRF2D3W0D1 207 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 J3KRW8 73 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 NTN3O00634 580 aaPredicted RBP3.53□□□□□ -1.84
USP48-215ENST00000534705 TIMM23O14925 209 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 CLGNO14967 610 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 SLC16A5O15375 505 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 HOXC11O43248 304 aaPredicted RBP3.53□□□□□ -1.84
USP48-215ENST00000534705 CH25HO95992 272 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 IGKV5-2P06315 115 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 HEXAP06865 529 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 TFPIP10646 304 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 SLC2A4P14672 509 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 ITGAXP20702 1163 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 RRP1P56182 461 aaKnown RBP3.53□□□□□ -1.84
USP48-215ENST00000534705 TUBA1BP68363 451 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 EFNB1P98172 346 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 NFATC4Q14934 902 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 HSPB2Q16082 182 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 CCDC96Q2M329 555 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 PARP10Q53GL7 1025 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 ESCO2Q56NI9 601 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 ZNF667Q5HYK9 610 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 FAM69BQ5VUD6 431 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 CCDC30Q5VVM6 783 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 MZT2BQ6NZ67 158 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 TMEM81Q6P7N7 255 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 C16orf82Q7Z2V1 217 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 KRT77Q7Z794 578 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 TADA2BQ86TJ2 420 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 ZSCAN30Q86W11 494 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 GJC3Q8NFK1 279 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 RUFY2Q8WXA3 655 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 ANP32BQ92688 251 aaKnown RBP3.53□□□□□ -1.84
USP48-215ENST00000534705 ZNF622Q969S3 477 aaKnown RBP eCLIP3.53□□□□□ -1.846e-16■□□□□ 9.6
USP48-215ENST00000534705 MAELQ96JY0 434 aaKnown RBP3.53□□□□□ -1.84
USP48-215ENST00000534705 NYXQ9GZU5 481 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 IL25Q9H293 177 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 SLC32A1Q9H598 525 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 SNTG1Q9NSN8 517 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 SLC13A4Q9UKG4 626 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 ZHX1Q9UKY1 873 aaPredicted RBP3.53□□□□□ -1.84
USP48-215ENST00000534705 A3GALT2U3KPV4 340 aa3.53□□□□□ -1.84
USP48-215ENST00000534705 MYH1P12882 1939 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 CDHR2Q9BYE9 1310 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 PHIPQ8WWQ0 1821 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 CPED1A4D0V7 1026 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 PI4KAP2A4QPH2 592 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 MTA2O94776 668 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 AGR2O95994 175 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 PCCAP05165 728 aaPredicted RBP3.52□□□□□ -1.85
USP48-215ENST00000534705 IGHV4-30-4P0DP06 118 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 TNFAIP3P21580 790 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 ITGB8P26012 769 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 GABRB2P47870 512 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 CLCN5P51795 746 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 RAD23BP54727 409 aa3.52□□□□□ -1.85
USP48-215ENST00000534705 CDH15P55291 814 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms