RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 RBM22Q9NW64 420 aaKnown RBP eCLIP21.08■□□□□ 0.97
SSH3-211ENST00000534112 RCOR3Q9P2K3 495 aaPredicted RBP21.08■□□□□ 0.97
SSH3-211ENST00000534112 MAN2B2Q9Y2E5 1009 aa21.08■□□□□ 0.97
SSH3-211ENST00000534112 TTLL3Q9Y4R7 772 aa21.08■□□□□ 0.97
SSH3-211ENST00000534112 MRPS18BQ9Y676 258 aaKnown RBP21.08■□□□□ 0.97
SSH3-211ENST00000534112 MATN3O15232 486 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 GRID2O43424 1007 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 MFSD11O43934 449 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 ANKRD34CP0C6C1 535 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 SKILP12757 684 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 ZNF165P49910 485 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 RPL26P61254 145 aaKnown RBP21.07■□□□□ 0.96
SSH3-211ENST00000534112 CCDC122Q5T0U0 273 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 FAM26EQ8N5C1 309 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 AOPEPQ8N6M6 819 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 NIPA2Q8N8Q9 360 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 AVL9Q8NBF6 648 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 LPCAT1Q8NF37 534 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 BTBD6Q96KE9 485 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 ULBP3Q9BZM4 244 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 PCDH9Q9HC56 1237 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 PRDM8Q9NQV8 689 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 RPL26L1Q9UNX3 145 aaKnown RBP21.07■□□□□ 0.96
SSH3-211ENST00000534112 KCTD3Q9Y597 815 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 KCNMB2Q9Y691 235 aa21.07■□□□□ 0.96
SSH3-211ENST00000534112 SPENQ96T58 3664 aaKnown RBP21.07■□□□□ 0.96
SSH3-211ENST00000534112 MN1Q10571 1320 aaPredicted RBP21.06■□□□□ 0.96
SSH3-211ENST00000534112 USP9XQ93008 2570 aaPredicted RBP21.06■□□□□ 0.96
SSH3-211ENST00000534112 C1orf232A0A0U1RR37 186 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 LILRA5A6NI73 299 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 NUAK1O60285 661 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 CD48P09326 243 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 CA4P22748 312 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 GFERP55789 205 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 UBE2IP63279 158 aaKnown RBP21.06■□□□□ 0.96
SSH3-211ENST00000534112 FOXM1Q08050 763 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 NIPAL4Q0D2K0 466 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 KLRB1Q12918 225 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 TIGD7Q6NT04 549 aaPredicted RBP21.06■□□□□ 0.96
SSH3-211ENST00000534112 PHYKPLQ8IUZ5 450 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 LURAP1LQ8IV03 231 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 FAM71BQ8TC56 605 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 C9orf72Q96LT7 481 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 PLEKHG4BQ96PX9 1271 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 CARD9Q9H257 536 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 ATXN10Q9UBB4 475 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 AMACRQ9UHK6 382 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 TP53TG5Q9Y2B4 290 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 PCDHB3Q9Y5E6 796 aa21.06■□□□□ 0.96
SSH3-211ENST00000534112 RGSL1A5PLK6 1076 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 C9P02748 559 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 ZNF28P17035 718 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 CCNCP24863 283 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 DLSTP36957 453 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 CLCNKAP51800 687 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 ANKRD20A8PQ5CZ79 823 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 C6orf15Q6UXA7 325 aaPredicted RBP21.05■□□□□ 0.96
SSH3-211ENST00000534112 CCHCR1Q8TD31 782 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 FATE1Q969F0 183 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 MIB2Q96AX9 1013 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 RNF31Q96EP0 1072 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 TSGA13Q96PP4 275 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 PSMG3-AS1Q96PY0 264 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 UCK1Q9HA47 277 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 HAUS2Q9NVX0 235 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 PKD2L2Q9NZM6 624 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 OGFRQ9NZT2 677 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 IP6K2Q9UHH9 426 aa21.05■□□□□ 0.96
SSH3-211ENST00000534112 K7EM74 188 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 ZNF8P17098 575 aaPredicted RBP21.04■□□□□ 0.96
SSH3-211ENST00000534112 TYRP1P17643 537 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 PAFAH1B3Q15102 231 aaKnown RBP21.04■□□□□ 0.96
SSH3-211ENST00000534112 IFI16Q16666 785 aaKnown RBP21.04■□□□□ 0.96
SSH3-211ENST00000534112 QPCTQ16769 361 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 NCBP2-AS2Q69YL0 99 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 TMEM26Q6ZUK4 368 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 MLPHQ9BV36 600 aaPredicted RBP21.04■□□□□ 0.96
SSH3-211ENST00000534112 OR2AG1Q9H205 316 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 ARFGAP3Q9NP61 516 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 KLC4Q9NSK0 619 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 SCHIP1Q9P0W5 487 aaPredicted RBP21.04■□□□□ 0.96
SSH3-211ENST00000534112 ANAPC7Q9UJX3 599 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 CROTQ9UKG9 612 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 ADGRG1Q9Y653 693 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 SLC30A1Q9Y6M5 507 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 NOTCH2Q04721 2471 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 SPTAN1Q13813 2472 aaKnown RBP21.04■□□□□ 0.96
SSH3-211ENST00000534112 TEX15Q9BXT5 2789 aa21.04■□□□□ 0.96
SSH3-211ENST00000534112 NBPF19A0A087WUL8 3843 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 ANKRD66B4E2M5 251 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 MKRN2OSH3BPM6 223 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 MTSS1O43312 755 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 HLA-DQB2P05538 268 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 XRCC1P18887 633 aaPredicted RBP21.03■□□□□ 0.96
SSH3-211ENST00000534112 NR1D1P20393 614 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 CD97P48960 835 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 ARSEP51690 589 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 SH3BP2P78314 561 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 DPYSL3Q14195 570 aa21.03■□□□□ 0.96
SSH3-211ENST00000534112 ERV3-1Q14264 604 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms