RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 GSK3BP49841 420 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 UFM1P61960 85 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 TIAL1Q01085 375 aaKnown RBP eCLIP19.22■□□□□ 0.67
CAPN1-226ENST00000533820 YWHAHQ04917 246 aaPredicted RBP19.22■□□□□ 0.67
CAPN1-226ENST00000533820 FSCN1Q16658 493 aaKnown RBP19.22■□□□□ 0.67
CAPN1-226ENST00000533820 GABPB2Q8TAK5 448 aaPredicted RBP19.22■□□□□ 0.67
CAPN1-226ENST00000533820 L3HYPDHQ96EM0 354 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 GPATCH1Q9BRR8 931 aaKnown RBP19.22■□□□□ 0.67
CAPN1-226ENST00000533820 TRMOQ9BU70 441 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 VPS45Q9NRW7 570 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 RNF112Q9ULX5 631 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 HAS3O00219 553 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 CDC7O00311 574 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 MUSKO15146 869 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 MGEA5O60502 916 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 ATE1O95260 518 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 CHRNA1P02708 482 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
CAPN1-226ENST00000533820 LBPP18428 481 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 PMS2P3Q13401 168 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 TMEM26Q6ZUK4 368 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 ADGRG5Q8IZF4 528 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 NAT16Q8N8M0 369 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 STON2Q8WXE9 905 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 COX4I2Q96KJ9 171 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 MFSD1Q9H3U5 465 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 AGPAT4Q9NRZ5 378 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 ARMC1Q9NVT9 282 aa19.22■□□□□ 0.67
CAPN1-226ENST00000533820 A0A087WXM4 84 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 H0YJX3 145 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 RHOBTB1O94844 696 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 ZNF37AP17032 561 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 EEF1B2P24534 225 aaKnown RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 CPT1AP50416 773 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 ARPP19P56211 112 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 CREB5Q02930 508 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 POLD3Q15054 466 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 XKR5Q6UX68 686 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 CFAP52Q8N1V2 620 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 CDK15Q96Q40 435 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 KCTD14Q9BQ13 255 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 CXorf21Q9HAI6 301 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 A0A1W2PPW3 197 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 S100A1P23297 94 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 CLCQ05315 142 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 LIPEQ05469 1076 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 EIF4EBP2Q13542 120 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 UGT3A1Q6NUS8 523 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 NSMCE3Q96MG7 304 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 RPRD1AQ96P16 312 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 NEURL2Q9BR09 285 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 SARS2Q9NP81 518 aaKnown RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 INTS7Q9NVH2 962 aaKnown RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 GALPQ9UBC7 116 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 GIT1Q9Y2X7 761 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 MAGED1Q9Y5V3 778 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 FUCA1P04066 466 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 MZF1P28698 734 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 HOXC13P31276 330 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 CDKN1CP49918 316 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-226ENST00000533820 TBX4P57082 545 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 PTPRRQ15256 657 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 MS4A13Q5J8X5 152 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 GNASQ5JWF2 1037 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 TTC9BQ8N6N2 239 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 RNF145Q96MT1 663 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 ALG2Q9H553 416 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 ARNT2Q9HBZ2 717 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 VPS51Q9UID3 782 aa19.21■□□□□ 0.67
CAPN1-226ENST00000533820 TRIM64CA6NLI5 447 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 ATXN1LP0C7T5 689 aaKnown RBP19.2■□□□□ 0.66
CAPN1-226ENST00000533820 TRPC1P48995 793 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 ATP6V0D1P61421 351 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 PYCR3Q53H96 274 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 CCDC117Q8IWD4 279 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-226ENST00000533820 FBXO39Q8N4B4 442 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 STARD8Q92502 1023 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 GFM2Q969S9 779 aaKnown RBP19.2■□□□□ 0.66
CAPN1-226ENST00000533820 MYEOVQ96EZ4 313 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 CENPNQ96H22 339 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-226ENST00000533820 HOPXQ9BPY8 73 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-226ENST00000533820 GID8Q9NWU2 228 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 MROH6A6NGR9 719 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 ENDOUP21128 410 aaKnown RBP19.2■□□□□ 0.66
CAPN1-226ENST00000533820 AAK1Q2M2I8 961 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 FGD3Q5JSP0 725 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 GDF6Q6KF10 455 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-226ENST00000533820 PHYKPLQ8IUZ5 450 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 THEM5Q8N1Q8 247 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 ARRDC2Q8TBH0 407 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 HM13Q8TCT9 377 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 GTF3C2Q8WUA4 911 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-226ENST00000533820 TRIM15Q9C019 465 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 GMIPQ9P107 970 aa19.2■□□□□ 0.66
CAPN1-226ENST00000533820 FBXO9Q9UK97 447 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-226ENST00000533820 NPEPPSL1A6NEC2 478 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 CD247P20963 164 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 FDXRP22570 491 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 BCAP31P51572 246 aa19.19■□□□□ 0.66
CAPN1-226ENST00000533820 KCNK10P57789 538 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms