RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 TRIM8Q9BZR9 551 aa11.21□□□□□ -0.61
AMBRA1-211ENST00000533727 BCAS3Q9H6U6 928 aa11.21□□□□□ -0.61
AMBRA1-211ENST00000533727 SLC12A4Q9UP95 1085 aa11.21□□□□□ -0.61
AMBRA1-211ENST00000533727 PCDHGB3Q9Y5G1 929 aa11.21□□□□□ -0.61
AMBRA1-211ENST00000533727 CCDC154A6NI56 674 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 CLOCKO15516 846 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 SNX3O60493 162 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 CA3P07451 260 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 TTKP33981 857 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 RGS21Q2M5E4 152 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 PLEKHG4Q58EX7 1191 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 FBXL22Q6P050 247 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF852Q6ZMS4 543 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 ARCQ7LC44 396 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF280BQ86YH2 543 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 ACTRT2Q8TDY3 377 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 SLC35F5Q8WV83 523 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 TUBGCP5Q96RT8 1024 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 GRIP2Q9C0E4 1043 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 ATXN10Q9UBB4 475 aa11.21□□□□□ -0.62
AMBRA1-211ENST00000533727 CBFA2T3O75081 653 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 ITGA2BP08514 1039 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 DLDP09622 509 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 VIPR1P32241 457 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 PTDSS1P48651 473 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 IFI35P80217 286 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 GSTA3Q16772 222 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 DRICH1Q6PGQ1 229 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 BNIPLQ7Z465 357 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 NRSN1Q8IZ57 195 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 SDCBP2Q9H190 292 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 INTS10Q9NVR2 710 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 NUDT4Q9NZJ9 180 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 CDC14AQ9UNH5 594 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 OAZ2O95190 189 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 OR6A2O95222 327 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 PIM1P11309 404 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 GRIA2P42262 883 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 WDR5P61964 334 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 RPS24P62847 133 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 TTMPQ5BVD1 217 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 TSTD2Q5T7W7 516 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 ANXA8L1Q5VT79 327 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 WDR48Q8TAF3 677 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 DEPDC7Q96QD5 511 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 CCDC177Q9NQR7 707 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 FBXL12Q9NXK8 326 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 DNAJB4Q9UDY4 337 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 PNMA8CA0A1B0GUJ8 204 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 UPK3BL1B0FP48 263 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 UPK3BL2E5RIL1 263 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 GABRDO14764 452 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 TPD52L2O43399 206 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 GATMP50440 423 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 HGSNATQ68CP4 663 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 SLC39A4Q6P5W5 647 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 AMZ2Q86W34 360 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 SAMD14Q8IZD0 417 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 RASGEF1CQ8N431 466 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 PLGRKTQ9HBL7 147 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 SEMA4BQ9NPR2 832 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 PCDHGC4Q9Y5F7 938 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 TMEM189-UBE2V1I3L0A0 370 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 ABLIM1O14639 778 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 LIN7AO14910 233 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 TSPAN9O75954 239 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 UNC5CO95185 931 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 GJB5O95377 273 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 ENO2P09104 434 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 FASP25445 335 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 RPL5P46777 297 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 MARCKSL1P49006 195 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 MS4A13Q5J8X5 152 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 TTC27Q6P3X3 843 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 PROX1Q92786 737 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 RIT1Q92963 219 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 OXNAD1Q96HP4 312 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 GDE1Q9NZC3 331 aa11.2□□□□□ -0.62
AMBRA1-211ENST00000533727 E9PBE3 544 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 TRAFD1O14545 582 aaPredicted RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 TEX28O15482 410 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 KLHL41O60662 606 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SLC35G6P0C7Q6 338 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 IMPDH2P12268 514 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SSR2P43308 183 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 CHN2P52757 468 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 ITGADQ13349 1161 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 NEDD8Q15843 81 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SNAP47Q5SQN1 464 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 LY6G5CQ5SRR4 150 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 CMTM8Q8IZV2 173 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 RPL10LQ96L21 214 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SMOQ99835 787 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 FAM83CQ9BQN1 747 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 C1orf50Q9BV19 199 aa11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 DNAAF2Q9NVR5 837 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 SPATA6Q9NWH7 488 aaPredicted RBP11.19□□□□□ -0.62
AMBRA1-211ENST00000533727 DKK3Q9UBP4 350 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms