RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 SLC35G6P0C7Q6 338 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 FGFR3P22607 806 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TCEA1P23193 301 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 CTSOP43234 321 aaPredicted RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 RPIAP49247 311 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 HNMTP50135 292 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TAS2R41P59536 307 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 RHAGQ02094 409 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TIGD2Q4W5G0 525 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 ATXN7L2Q5T6C5 722 aaPredicted RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TMEM164Q5U3C3 297 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 MON1BQ7L1V2 547 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 ARMCX6Q7L4S7 300 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 PEG10Q86TG7 708 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 PEX5LQ8IYB4 626 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 UNC5BQ8IZJ1 945 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 LEMD2Q8NC56 503 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 ZCCHC10Q8TBK6 192 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TEX47Q8TBZ9 253 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 PYDC1Q8WXC3 89 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 POP5Q969H6 163 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 PMEPA1Q969W9 287 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SRMSQ9H3Y6 488 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 MIOSQ9NXC5 875 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 IKZF3Q9UKT9 509 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC45A1Q9Y2W3 748 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 GMPPBQ9Y5P6 360 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 UNCXA6NJT0 531 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 HMGB3O15347 200 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 AP2A1O95782 977 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 ECDO95905 644 aaPredicted RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TRAF3Q13114 568 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 LAPTM5Q13571 262 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 NDUFAF6Q330K2 333 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SPANXN2Q5MJ10 180 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 LDB1Q86U70 411 aaPredicted RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 LRRN4CLQ8ND94 238 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 OR10H5Q8NGA6 315 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC9A6Q92581 669 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SIPA1Q96FS4 1042 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TEFMQ96QE5 360 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 GAL3ST4Q96RP7 486 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 XPNPEP1Q9NQW7 623 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 CHRAC1Q9NRG0 131 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TRPS1Q9UHF7 1281 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SAMHD1Q9Y3Z3 626 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 A0A087WXM4 84 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 DHX15O43143 795 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 COL6A2P12110 1019 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 ALDH4A1P30038 563 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 ASMTP46597 345 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 ZNF155Q12901 538 aaPredicted RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TOP3AQ13472 1001 aaPredicted RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 HNRNPDQ14103 355 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 DGCR6Q14129 220 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 CLHC1Q8NHS4 586 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 RBM18Q96H35 190 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 LRTM1Q9HBL6 345 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 DNAJC28Q9NX36 388 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 ZNF624Q9P2J8 865 aaPredicted RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 MTRRQ9UBK8 725 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 ERVK-11Q9UQG0 969 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 Q9Y3F1 56 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 RBM7Q9Y580 266 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 IGKV6D-41A0A0C4DH26 115 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 A0A0U1RQJ8 604 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 OR1F1O43749 312 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 KIF1CO43896 1103 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 MFN2O95140 757 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 IL6P05231 212 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 NUDT17P0C025 328 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 CCNA2P20248 432 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 UGT1A5P35504 534 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TRIM25Q14258 630 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 NRF1Q16656 503 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TMEM63BQ5T3F8 832 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SERPINA9Q86WD7 417 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 CLVS1Q8IUQ0 354 aaPredicted RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SCAMP5Q8TAC9 235 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 NPLOC4Q8TAT6 608 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 NEK7Q8TDX7 302 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 PSMG2Q969U7 264 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 CDADC1Q9BWV3 514 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 UNC93B1Q9H1C4 597 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 PNPLA8Q9NP80 782 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 MRPL39Q9NYK5 338 aaKnown RBP6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 HCN3Q9P1Z3 774 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 YIPF1Q9Y548 306 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SLIT3O75094 1523 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 CCL22O00626 93 aa6.34□□□□□ -1.39
UBQLN1-206ENST00000533705 CLDN9O95484 217 aa6.34□□□□□ -1.39
UBQLN1-206ENST00000533705 IFNGP01579 166 aa6.34□□□□□ -1.39
UBQLN1-206ENST00000533705 ACTR1BP42025 376 aa6.34□□□□□ -1.39
UBQLN1-206ENST00000533705 KIR3DL1P43629 444 aa6.34□□□□□ -1.39
UBQLN1-206ENST00000533705 CACNA2D1P54289 1103 aa6.34□□□□□ -1.39
UBQLN1-206ENST00000533705 ACTR1AP61163 376 aa6.34□□□□□ -1.39
UBQLN1-206ENST00000533705 SEMG2Q02383 582 aa6.34□□□□□ -1.39
UBQLN1-206ENST00000533705 ARHGAP1Q07960 439 aa6.34□□□□□ -1.39
UBQLN1-206ENST00000533705 TAF5Q15542 800 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms