RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CHST15Q7LFX5 561 aaPredicted RBP29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 B3GNT8Q7Z7M8 397 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 TTC30BQ8N4P2 665 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 RNF10Q8N5U6 811 aaKnown RBP29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 WDR36Q8NI36 951 aaKnown RBP29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 GLYATL1Q969I3 302 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 PLEKHG4BQ96PX9 1271 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 GORASP1Q9BQQ3 440 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 TRIM39Q9HCM9 518 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 ARFGAP3Q9NP61 516 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 HACD3Q9P035 362 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 ATXN7L1Q9ULK2 861 aaPredicted RBP29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 PCDHGA8Q9Y5G5 932 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 CAPN6Q9Y6Q1 641 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 UNC13CQ8NB66 2214 aa29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 SCN8AQ9UQD0 1980 aa29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 CCDC187A0A096LP49 1063 aa29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 STK10O94804 968 aaKnown RBP29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 PTMAP06454 111 aaKnown RBP29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 INHBCP55103 352 aa29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 BIRC2Q13490 618 aa29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 NR1D2Q14995 579 aa29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 COL28A1Q2UY09 1125 aa29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 LIN37Q96GY3 246 aaPredicted RBP29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 PRR11Q96HE9 360 aaPredicted RBP29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 OR2AG1Q9H205 316 aa29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 ADGRG1Q9Y653 693 aa29.98■■■□□ 2.39
SSSCA1-207ENST00000533115 FAM208BQ5VWN6 2430 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 GOLGA6L9A6NEM1 432 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 RRP8O43159 456 aaKnown RBP29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 GRID2O43424 1007 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 ZNF8P17098 575 aaPredicted RBP29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 ERVPABLB-1P60509 514 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 ZNF648Q5T619 568 aaPredicted RBP29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 LRRC69Q6ZNQ3 347 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 PHYKPLQ8IUZ5 450 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 BLOC1S5Q8TDH9 187 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 HES6Q96HZ4 224 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 TMEM74Q96NL1 305 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 FOXP3Q9BZS1 431 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 EPB41L5Q9HCM4 733 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 ASCL3Q9NQ33 180 aa29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 ZFC3H1O60293 1989 aaKnown RBP29.97■■■□□ 2.39
SSSCA1-207ENST00000533115 KIF26BQ2KJY2 2108 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 GPR89AB7ZAQ6 455 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 ZW10O43264 779 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 B4GAT1O43505 415 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 ZNF189O75820 626 aaPredicted RBP29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 AGTP01019 485 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 GPR89BP0CG08 455 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 ACP5P13686 325 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 RBMS1P29558 406 aaKnown RBP29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 CCKBRP32239 447 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 OR1D5P58170 312 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 FOXR1Q6PIV2 292 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 GLT6D1Q7Z4J2 308 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 ADGRG6Q86SQ4 1221 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 TTC13Q8NBP0 860 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 SPATA13Q96N96 652 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 SLC46A1Q96NT5 459 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 FICDQ9BVA6 458 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 TSGA10Q9BZW7 698 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 STRADBQ9C0K7 418 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 THSD1Q9NS62 852 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 IL17CQ9P0M4 197 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 RALYQ9UKM9 306 aaKnown RBP29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 AAR2Q9Y312 384 aaKnown RBP29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 ZFYVE26Q68DK2 2539 aa29.96■■■□□ 2.39
SSSCA1-207ENST00000533115 PMS2P1A4D2B8 440 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 PPM1DO15297 605 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 PSMB4P28070 264 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 ALDH4A1P30038 563 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 GPR3P46089 330 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 PRPSAP1Q14558 356 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 ZDHHC20Q5W0Z9 365 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 CCDC110Q8TBZ0 833 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 VPS35Q96QK1 796 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 KCNK6Q9Y257 313 aa29.95■■■□□ 2.39
SSSCA1-207ENST00000533115 EML2O95834 649 aa29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 ABCG1P45844 678 aa29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 PCBP4P57723 403 aaKnown RBP29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 ZFP36L1Q07352 338 aaKnown RBP29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 EIF3IQ13347 325 aaKnown RBP29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 KLF1Q13351 362 aaPredicted RBP29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 AMZ1Q400G9 498 aa29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 ATP13A5Q4VNC0 1218 aa29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 SFRP1Q8N474 314 aa29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 DTX3LQ8TDB6 740 aa29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 IL26Q9NPH9 171 aa29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 TBC1D29Q9UFV1 150 aa29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 TMPRSS11EQ9UL52 423 aa29.94■■■□□ 2.38
SSSCA1-207ENST00000533115 TRBV23OR9-2A0A075B6M9 112 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 CHUKO15111 745 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 ARHGAP6O43182 974 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 KRT86O43790 486 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 ITPKBP27987 946 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 ADRA1AP35348 466 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 SPAM1P38567 509 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 RANBP10Q6VN20 620 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms