RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 UNC79Q9P2D8 2635 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 TMEM191CA6NGB0 347 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 LGALS16A8MUM7 142 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 ATMINO43313 823 aaPredicted RBP11.42□□□□□ -0.58
CMTM1-216ENST00000533078 GRID2O43424 1007 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 DNAJC6O75061 913 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 LRCH4O75427 683 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 CREG1O75629 220 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 KIAA0754O94854 1291 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 UBXN7O94888 489 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 EML2O95834 649 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 RECKO95980 971 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 ATP1A1P05023 1023 aaKnown RBP11.42□□□□□ -0.58
CMTM1-216ENST00000533078 PCK1P35558 622 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 SEPHS1P49903 392 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 ZNF165P49910 485 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 PGDP52209 483 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 STC1P52823 247 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 KRT81Q14533 505 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 DPYSL2Q16555 572 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 INSCQ1MX18 579 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 SMTNL2Q2TAL5 461 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 TIGD7Q6NT04 549 aaPredicted RBP11.42□□□□□ -0.58
CMTM1-216ENST00000533078 PPP1R3BQ86XI6 285 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 SSC4DQ8WTU2 575 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 ZDHHC12Q96GR4 267 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 CARD9Q9H257 536 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 UCK1Q9HA47 277 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 PDE7BQ9NP56 450 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 SIDT1Q9NXL6 827 aaKnown RBP11.42□□□□□ -0.58
CMTM1-216ENST00000533078 TLK1Q9UKI8 766 aa11.42□□□□□ -0.58
CMTM1-216ENST00000533078 C1orf232A0A0U1RR37 186 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 RGSL1A5PLK6 1076 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 A6NCN8 305 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 PDZK1P1A8MUH7 402 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 GPR89AB7ZAQ6 455 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 C21orf140B9A014 251 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 PEX11BO96011 259 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 PDHA1P08559 390 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 GPR89BP0CG08 455 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 MYBL1P10243 752 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 TYRP1P17643 537 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 AMPD1P23109 780 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 GFERP55789 205 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 RPL26P61254 145 aaKnown RBP11.41□□□□□ -0.58
CMTM1-216ENST00000533078 PDE1BQ01064 536 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 DNASE1L3Q13609 305 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 PTPRRQ15256 657 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 ANKRD20A8PQ5CZ79 823 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 ZNF569Q5MCW4 686 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 CCDC122Q5T0U0 273 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 CAPRIN2Q6IMN6 1127 aaKnown RBP11.41□□□□□ -0.58
CMTM1-216ENST00000533078 RFLNAQ6ZTI6 216 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 POLNQ7Z5Q5 900 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 APLFQ8IW19 511 aaPredicted RBP11.41□□□□□ -0.58
CMTM1-216ENST00000533078 TP53INP2Q8IXH6 220 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 RBM12BQ8IXT5 1001 aaKnown RBP11.41□□□□□ -0.58
CMTM1-216ENST00000533078 THAP4Q8WY91 577 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 ZNF653Q96CK0 615 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 ELMO2Q96JJ3 720 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 CSPG4P5Q96PW8 444 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 AGAP2Q99490 1192 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 SLC29A3Q9BZD2 475 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 FAM83DQ9H4H8 585 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 ZNF768Q9H5H4 540 aaKnown RBP11.41□□□□□ -0.58
CMTM1-216ENST00000533078 FANCLQ9NW38 375 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 CUEDC1Q9NWM3 386 aaPredicted RBP11.41□□□□□ -0.58
CMTM1-216ENST00000533078 TAS2R14Q9NYV8 317 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 AMACRQ9UHK6 382 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 MYO6Q9UM54 1294 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 RPL26L1Q9UNX3 145 aaKnown RBP11.41□□□□□ -0.58
CMTM1-216ENST00000533078 PCDHGA6Q9Y5G7 932 aa11.41□□□□□ -0.58
CMTM1-216ENST00000533078 NUAK1O60285 661 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 FZD6O60353 706 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 CLDN7O95471 211 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 C9P02748 559 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 FTLP02792 175 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-216ENST00000533078 ZNF28P17035 718 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 VCLP18206 1134 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 XRCC1P18887 633 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-216ENST00000533078 GNLYP22749 145 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 F8A1P23610 371 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 VARSP26640 1264 aaKnown RBP11.4□□□□□ -0.58
CMTM1-216ENST00000533078 SPINT3P49223 89 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 ARL4DP49703 201 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 RPS15P62841 145 aaKnown RBP11.4□□□□□ -0.58
CMTM1-216ENST00000533078 UBE2IP63279 158 aaKnown RBP11.4□□□□□ -0.58
CMTM1-216ENST00000533078 ASIC2Q16515 512 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.4□□□□□ -0.58
CMTM1-216ENST00000533078 TDRD12Q587J7 1177 aaKnown RBP11.4□□□□□ -0.58
CMTM1-216ENST00000533078 CACHD1Q5VU97 1274 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 TMEM26Q6ZUK4 368 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.4□□□□□ -0.58
CMTM1-216ENST00000533078 ARFGAP1Q8N6T3 406 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 LPCAT1Q8NF37 534 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 ERGIC2Q96RQ1 377 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 SLC25A23Q9BV35 468 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 SPATA16Q9BXB7 569 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 ADGRE3Q9BY15 652 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 PCDH9Q9HC56 1237 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms