RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 GPSM3Q9Y4H4 160 aa19.67■□□□□ 0.74
CPSF1-209ENST00000532725 ASXL3Q9C0F0 2248 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 EME2A4GXA9 379 aaPredicted RBP19.66■□□□□ 0.74
CPSF1-209ENST00000532725 E7EVH7 732 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 HYAL3O43820 417 aaPredicted RBP19.66■□□□□ 0.74
CPSF1-209ENST00000532725 RFPL3O75679 317 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 APRTP07741 180 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 CDK4P11802 303 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 ZNF8P17098 575 aaPredicted RBP19.66■□□□□ 0.74
CPSF1-209ENST00000532725 AK4P27144 223 aaPredicted RBP19.66■□□□□ 0.74
CPSF1-209ENST00000532725 LMAN1P49257 510 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 XIAPP98170 497 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 CDH17Q12864 832 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 ILF3Q12906 894 aaKnown RBP eCLIP19.66■□□□□ 0.74
CPSF1-209ENST00000532725 NR0B2Q15466 257 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 KHDC1Q4VXA5 237 aaKnown RBP19.66■□□□□ 0.74
CPSF1-209ENST00000532725 CCDC157Q569K6 752 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 GALNT13Q8IUC8 556 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 CREG2Q8IUH2 290 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 C17orf53Q8N3J3 647 aaPredicted RBP19.66■□□□□ 0.74
CPSF1-209ENST00000532725 ZNF398Q8TD17 642 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 OR2M4Q96R27 311 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 GSDMCQ9BYG8 508 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 CASS4Q9NQ75 786 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 SPATS2LQ9NUQ6 558 aaKnown RBP19.66■□□□□ 0.74
CPSF1-209ENST00000532725 FKBPLQ9UIM3 349 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 NEU2Q9Y3R4 380 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 SCN8AQ9UQD0 1980 aa19.66■□□□□ 0.74
CPSF1-209ENST00000532725 FAM221BA6H8Z2 402 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 MROH6A6NGR9 719 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 GPR89AB7ZAQ6 455 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 CHUKO15111 745 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 KRT14P02533 472 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 GPR89BP0CG08 455 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 PSMA3P25788 255 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 POU6F1Q14863 301 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 TRIP13Q15645 432 aaPredicted RBP19.65■□□□□ 0.74
CPSF1-209ENST00000532725 CERCAMQ5T4B2 595 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 CCDC137Q6PK04 289 aaKnown RBP19.65■□□□□ 0.74
CPSF1-209ENST00000532725 DHRS13Q6UX07 377 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 PHYKPLQ8IUZ5 450 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 ARL10Q8N8L6 244 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 GPR156Q8NFN8 814 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 GLMNQ92990 594 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 SCNM1Q9BWG6 230 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 EIF2B3Q9NR50 452 aaKnown RBP19.65■□□□□ 0.74
CPSF1-209ENST00000532725 TAAR2Q9P1P5 351 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 GULP1Q9UBP9 304 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 APPL1Q9UKG1 709 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 PADI4Q9UM07 663 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 PRKAB1Q9Y478 270 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 SAR1BQ9Y6B6 198 aa19.65■□□□□ 0.74
CPSF1-209ENST00000532725 ARHGEF17Q96PE2 2063 aaPredicted RBP19.64■□□□□ 0.74
CPSF1-209ENST00000532725 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.64■□□□□ 0.73
CPSF1-209ENST00000532725 CTAGE9A4FU28 777 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 AGAP14A8MT82 685 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 GPR39O43194 453 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 GRID2O43424 1007 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 VEGFDO43915 354 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 NOBOXO60393 691 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 PHF2O75151 1096 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 MTX2O75431 263 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 SRP72O76094 671 aaKnown RBP19.64■□□□□ 0.73
CPSF1-209ENST00000532725 GP1BAP07359 652 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 SPINK2P20155 84 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 HADHAP40939 763 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 RPIAP49247 311 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 TMPRSS15P98073 1019 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 E2F1Q01094 437 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 TMEM115Q12893 351 aaPredicted RBP19.64■□□□□ 0.73
CPSF1-209ENST00000532725 PEX6Q13608 980 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 ITGA9Q13797 1035 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 LRP8Q14114 963 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 SMAD1Q15797 465 aaKnown RBP19.64■□□□□ 0.73
CPSF1-209ENST00000532725 GUSBP11Q6P575 273 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 PPP1R21Q6ZMI0 780 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 TMPRSS7Q7RTY8 843 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 SFTPA2Q8IWL1 248 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 DNAAF3Q8N9W5 541 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 DPEP2Q9H4A9 486 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 EVA1BQ9NVM1 165 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 NLE1Q9NVX2 485 aaPredicted RBP19.64■□□□□ 0.73
CPSF1-209ENST00000532725 SMOXQ9NWM0 555 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 SIRPGQ9P1W8 387 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 ANGPTL2Q9UKU9 493 aa19.64■□□□□ 0.73
CPSF1-209ENST00000532725 CPED1A4D0V7 1026 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 CDK14O94921 469 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 PRAMEF1O95521 474 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 FNTAP49354 379 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 BASP1P80723 227 aaKnown RBP19.63■□□□□ 0.73
CPSF1-209ENST00000532725 SLC30A9Q6PML9 568 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 CHST15Q7LFX5 561 aaPredicted RBP19.63■□□□□ 0.73
CPSF1-209ENST00000532725 C17orf82Q86X59 251 aaPredicted RBP19.63■□□□□ 0.73
CPSF1-209ENST00000532725 KYQ8NBH2 561 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 IFI44Q8TCB0 444 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 STYXQ8WUJ0 223 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 CDKN2AIPNLQ96HQ2 116 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 DNAJC1Q96KC8 554 aaKnown RBP19.63■□□□□ 0.73
CPSF1-209ENST00000532725 ASB8Q9H765 288 aa19.63■□□□□ 0.73
CPSF1-209ENST00000532725 GOLGA6L10A0A0M3HER8 536 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms