RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 FZD10Q9ULW2 581 aa14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 PCDHGC3Q9UN70 934 aa14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 UNCXA6NJT0 531 aa14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 TRAFD1O14545 582 aaPredicted RBP14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 PBX1P40424 430 aa14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 CDH13P55290 713 aa14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 MZT2AQ6P582 158 aa14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 ADAMTS15Q8TE58 950 aa14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 WFIKKN2Q8TEU8 576 aa14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 FZD8Q9H461 694 aa14.71□□□□□ -0.05
PCDHA9-202ENST00000532602 TRIM43BA6NCK2 446 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 TRAF3Q13114 568 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 LAPTM5Q13571 262 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 GRB14Q14449 540 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 UBXN2BQ14CS0 331 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 NPY5RQ15761 445 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 C9orf64Q5T6V5 341 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 GALNT18Q6P9A2 607 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 FAM129CQ86XR2 697 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 MCEMP1Q8IX19 187 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 ZBTB2Q8N680 514 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 LEMD2Q8NC56 503 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 OR52E6Q96RD3 313 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 GINS4Q9BRT9 223 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 SGK2Q9HBY8 427 aa14.71□□□□□ -0.06
PCDHA9-202ENST00000532602 COX4I1P13073 169 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 CMPK1P30085 196 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 BUD31P41223 144 aaPredicted RBP14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 ASMTP46597 345 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 PSMD4P55036 377 aaKnown RBP14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 RPTNQ6XPR3 784 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 UNC93B1Q9H1C4 597 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 TRIM38O00635 465 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 ASLP04424 464 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 RCVRNP35243 200 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 ACTR3P61158 418 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 MRPS22P82650 360 aaKnown RBP14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 MPP1Q00013 466 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 PDK4Q16654 411 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 TPGS2Q68CL5 300 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 MTRRQ9UBK8 725 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC28A2O43868 658 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 NBNO60934 754 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 BLKP51451 505 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 HTRA3P83110 453 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 CPTPQ5TA50 214 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 MAT2BQ9NZL9 334 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 RHPN2P1A8MT19 583 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 ATP6V1G2O95670 118 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 TTKP33981 857 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 UGT1A5P35504 534 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 GRIA3P42263 894 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 ENPEPQ07075 957 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 TAB1Q15750 504 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 NEDD8Q15843 81 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 CLHC1Q8NHS4 586 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 GBA3Q9H227 469 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 NUDT17P0C025 328 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 CDKN2BP42772 138 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 CA9Q16790 459 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 MREGQ8N565 214 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 TTC29Q8NA56 475 aaPredicted RBP14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 MIEF2Q96C03 454 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 TRIM8Q9BZR9 551 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC25A51Q9H1U9 297 aa14.7□□□□□ -0.06
PCDHA9-202ENST00000532602 OR10H3O60404 316 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 FSBPO95073 299 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 IFNGP01579 166 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 CDH3P22223 829 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 NDST2P52849 883 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 DAOAP59103 153 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 USP46P62068 366 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 POU5F1Q01860 360 aaKnown RBP14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 RFX4Q33E94 735 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 RNASEH2BQ5TBB1 312 aaKnown RBP14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 HECTD2Q5U5R9 776 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 FAM171BQ6P995 826 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 GKN1Q9NS71 199 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 POLR3HQ9Y535 204 aaPredicted RBP14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 BAZ2AQ9UIF9 1905 aaKnown RBP14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 STK16O75716 305 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC25A3Q00325 362 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 ZNF792Q3KQV3 632 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 KRT74Q7RTS7 529 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 ALYREFQ86V81 257 aaKnown RBP14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 ZNF563Q8TA94 476 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 TEX47Q8TBZ9 253 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 ENKURQ8TC29 256 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 TRAPPC9Q96Q05 1148 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC17A7Q9P2U7 560 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 SUV39H1O43463 412 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 CFHP08603 1231 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 TIE1P35590 1138 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 PNLIPRP1P54315 467 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 USP4Q13107 963 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 CFAP206Q8IYR0 622 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 MYDGFQ969H8 173 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 KLHL32Q96NJ5 620 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 NECTIN3Q9NQS3 549 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms