RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 PDGFAP04085 211 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 RNF224P0DH78 156 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 ZNF28P17035 718 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 CTPS1P17812 591 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 IL1R2P27930 398 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 CYLC1P35663 651 aaPredicted RBP9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 ARHGAP25P42331 645 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 CD97P48960 835 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 GPLD1P80108 840 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 ZBED6P86452 979 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 MC2RQ01718 297 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 PTSQ03393 145 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 DPTQ07507 201 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 RFTN1Q14699 578 aaPredicted RBP9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 PPP6R3Q5H9R7 873 aaPredicted RBP9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 SNAP47Q5SQN1 464 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 ERMARDQ5T6L9 678 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 TMCO4Q5TGY1 634 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 RAET1GQ6H3X3 334 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 ACAD10Q6JQN1 1059 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 ADAMTSL4Q6UY14 1074 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 MARK2Q7KZI7 788 aaKnown RBP9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 NRSN1Q8IZ57 195 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 NLGN4XQ8N0W4 816 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 LRRN4CLQ8ND94 238 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 NLGN4YQ8NFZ3 816 aaPredicted RBP9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 CPLX3Q8WVH0 158 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 STARD8Q92502 1023 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 SCRN2Q96FV2 425 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 COX14Q96I36 57 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 OR2M4Q96R27 311 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 NUDCD1Q96RS6 583 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 MGME1Q9BQP7 344 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 TP53TG5Q9Y2B4 290 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 PRKAB1Q9Y478 270 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 OAS3Q9Y6K5 1087 aaKnown RBP9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 CCDC88CQ9P219 2028 aa9.13□□□□□ -0.95
CHMP4A-205ENST00000531158 POLQO75417 2590 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 CCDC151A5D8V7 595 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 GOLGA6CA6NDK9 693 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 GOLGA6BA6NDN3 693 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 TMEM191CA6NGB0 347 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 PRR19A6NJB7 356 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 EIF3CLB5ME19 914 aaKnown RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 PSMD11O00231 422 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 STK17BO94768 372 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 AGFG2O95081 481 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 ZRANB2O95218 330 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 IPO7O95373 1038 aaKnown RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 ATP1A1P05023 1023 aaKnown RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 GOLGA6DP0CG33 693 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 PSMA2P25787 234 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 MIPP30301 263 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 HNRNPH3P31942 346 aaKnown RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 STAT5AP42229 794 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 UQCRFS1P47985 274 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 MLLT10P55197 1068 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 RAB15P59190 212 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 CBX1P83916 185 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 DMTNQ08495 405 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 BRD3Q15059 726 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 DEFB109BQ30KR1 87 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 LRRC66Q68CR7 880 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 TXNRD3NBQ6F5E7 133 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 PLEKHA7Q6IQ23 1121 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 DCUN1D2Q6PH85 259 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 WDR74Q6RFH5 385 aaPredicted RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 IRF2BP2Q7Z5L9 587 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 TMEM135Q86UB9 458 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 TICAM1Q8IUC6 712 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 ACRBPQ8NEB7 543 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 AP2M1Q96CW1 435 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 ZNF599Q96NL3 588 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 CATSPER2Q96P56 530 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 TEFMQ96QE5 360 aaKnown RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 EIF3CQ99613 913 aaKnown RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 TSGA10Q9BZW7 698 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 LZTFL1Q9NQ48 299 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 FBXO8Q9NRD0 319 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 SEPT11Q9NVA2 429 aaKnown RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 ZNF446Q9NWS9 450 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 GOLGA6AQ9NYA3 693 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 TBC1D29Q9UFV1 150 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 CNOT6Q9ULM6 557 aaKnown RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 PPIL1Q9Y3C6 166 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 KCNMB2Q9Y691 235 aa9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 EPN1Q9Y6I3 576 aaPredicted RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 SETD2Q9BYW2 2564 aaPredicted RBP9.12□□□□□ -0.95
CHMP4A-205ENST00000531158 MN1Q10571 1320 aaPredicted RBP9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 ZFHX3Q15911 3703 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 A1L4Q6 167 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 ANKRD62A6NC57 917 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 INPP4BO15327 924 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 CAPN5O15484 640 aaPredicted RBP9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 KRT86O43790 486 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 AMPD1P23109 780 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 MAP4P27816 1152 aaKnown RBP9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 GPR1P46091 355 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 HCAR3P49019 387 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms