RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 BNIP2Q12982 314 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 RPS6KA2Q15349 733 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 PSAPL1Q6NUJ1 521 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 NCEH1Q6PIU2 408 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 AHI1Q8N157 1196 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 GALNT15Q8N3T1 639 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 SLAIN1Q8ND83 568 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 ZFAND2BQ8WV99 257 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 C19orf43Q9BQ61 176 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 FKBPLQ9UIM3 349 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 NR5A2O00482 541 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 GIPC1O14908 333 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 TMCC1O94876 653 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 ABLIM3O94929 683 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 TNFAIP8O95379 198 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 TSPAN12O95859 305 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 C1RP00736 705 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 HSD17B1P14061 328 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 ZNF26P17031 533 aaPredicted RBP17.08■□□□□ 0.33
BRCA2-204ENST00000530893 GRB7Q14451 532 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 BLOC1S3Q6QNY0 202 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 RETREG3Q86VR2 466 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 TTC30BQ8N4P2 665 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 OR56A4Q8NGH8 313 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 SPATA16Q9BXB7 569 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 SEMA4BQ9NPR2 832 aaPredicted RBP17.08■□□□□ 0.33
BRCA2-204ENST00000530893 GKN1Q9NS71 199 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 ARMC1Q9NVT9 282 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 MAP10Q9P2G4 905 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 PCTPQ9UKL6 214 aa17.08■□□□□ 0.33
BRCA2-204ENST00000530893 AQP12BA6NM10 295 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 CDC7O00311 574 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 TRAF2Q12933 501 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 TAF12Q16514 161 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 CTSL3PQ5NE16 218 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 KIAA1841Q6NSI8 718 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 LAYNQ6UX15 382 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 AQP12AQ8IXF9 295 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 PIANPQ8IYJ0 282 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 OR2T34Q8NGX1 318 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 OR2T3Q8NH03 318 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 CD200R1Q8TD46 325 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 PDLIM5Q96HC4 596 aaKnown RBP17.08■□□□□ 0.32
BRCA2-204ENST00000530893 KCNA7Q96RP8 456 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 SLC24A3Q9HC58 644 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 IKZF3Q9UKT9 509 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 GPR45Q9Y5Y3 372 aa17.08■□□□□ 0.32
BRCA2-204ENST00000530893 TYW5A2RUC4 315 aaKnown RBP17.07■□□□□ 0.32
BRCA2-204ENST00000530893 NPEPPSL1A6NEC2 478 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 ENO4A6NNW6 628 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 E5RI56 91 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 SNX2O60749 519 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 PARNO95453 639 aaKnown RBP17.07■□□□□ 0.32
BRCA2-204ENST00000530893 SEC24AO95486 1093 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 CD160O95971 181 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 CYBBP04839 570 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 LINC00032P0C843 101 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 RPL17P18621 184 aaKnown RBP17.07■□□□□ 0.32
BRCA2-204ENST00000530893 SH3BGRP55822 239 aaPredicted RBP17.07■□□□□ 0.32
BRCA2-204ENST00000530893 CREB5Q02930 508 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 VEPH1Q14D04 833 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 ZRANB3Q5FWF4 1079 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 XKR7Q5GH72 579 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 CERS6Q6ZMG9 384 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 GPSM1Q86YR5 675 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 CHCHD4Q8N4Q1 142 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 SLCO4A1Q96BD0 722 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 ZNF597Q96LX8 424 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 HGH1Q9BTY7 390 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 TRIM54Q9BYV2 358 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 RNF38Q9H0F5 515 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 ZNF696Q9H7X3 374 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 PKP3Q9Y446 797 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 PCDHB1Q9Y5F3 818 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 TET1Q8NFU7 2136 aa17.07■□□□□ 0.32
BRCA2-204ENST00000530893 KIF3CO14782 793 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 FZD6O60353 706 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 TSPAN3O60637 253 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 NIPSNAP2O75323 286 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 CAPN3P20807 821 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 CDKN1CP49918 316 aaPredicted RBP17.06■□□□□ 0.32
BRCA2-204ENST00000530893 CACNG1Q06432 222 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 TCTN1Q2MV58 587 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 VPS26BQ4G0F5 336 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 EFHBQ8N7U6 833 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 SNX31Q8N9S9 440 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 SIDT2Q8NBJ9 832 aaKnown RBP17.06■□□□□ 0.32
BRCA2-204ENST00000530893 LINGO1Q96FE5 620 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 IGSF21Q96ID5 467 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 CLSTN3Q9BQT9 956 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 BRINP2Q9C0B6 783 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 MUC13Q9H3R2 512 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 MAGEE1Q9HCI5 957 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 RIC8BQ9NVN3 520 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 AIG1Q9NVV5 245 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 LHX3Q9UBR4 397 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 PTGDR2Q9Y5Y4 395 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 A0A1W2PP18 115 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 H0Y626 953 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms