RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CCDC33Q8N5R6 958 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 ZNF366Q8N895 744 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 CCDC26Q8TAB7 109 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 UCMAQ8WVF2 138 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 FATE1Q969F0 183 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 SCYL1Q96KG9 808 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 WDR24Q96S15 920 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 TACO1Q9BSH4 297 aaKnown RBP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 HEMGNQ9BXL5 484 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 OSBPL8Q9BZF1 889 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 KCNH6Q9H252 994 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 MTG2Q9H4K7 406 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 SAE1Q9UBE0 346 aaPredicted RBP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 LHX3Q9UBR4 397 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 IPO11Q9UI26 975 aaKnown RBP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 OAZ3Q9UMX2 235 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 JRKLQ9Y4A0 524 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 SLC30A1Q9Y6M5 507 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 CKAP5Q14008 2032 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 PTPRZ1P23471 2315 aaPredicted RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 ZSCAN5CA6NGD5 496 aaPredicted RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 FAM47E-STBD1D6RA91 191 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 DFFAO00273 331 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 HOXB2P14652 356 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 ZFXP17010 805 aaPredicted RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 CR2P20023 1033 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 GARSP41250 739 aaKnown RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 COPAP53621 1224 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 GPR85P60893 370 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 PPIDQ08752 370 aaKnown RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 TFDP2Q14188 446 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 NOMO1Q15155 1222 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 ANGPT1Q15389 498 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 CYTH1Q15438 398 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 SIX1Q15475 284 aaPredicted RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 CRY1Q16526 586 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 FNDC3BQ53EP0 1204 aaKnown RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 EOGTQ5NDL2 527 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 AGBL4Q5VU57 503 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 RETSATQ6NUM9 610 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 SERPINA13PQ6UXR4 307 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 RBM12BQ8IXT5 1001 aaKnown RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 CHPFQ8IZ52 775 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 ATPAF2Q8N5M1 289 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 MAML1Q92585 1016 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 PTPRN2Q92932 1015 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 HDAC11Q96DB2 347 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 TSGA13Q96PP4 275 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 KCNJ15Q99712 375 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 PRSS16Q9NQE7 514 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 SLC25A13Q9UJS0 675 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 R3HDM2Q9Y2K5 976 aaKnown RBP8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 RAD54BQ9Y620 910 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 FAM186AA6NE01 2351 aa8.85□□□□□ -0.99
CCDC90B-217ENST00000530253 GPR179Q6PRD1 2367 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 EDDM13A0A1B0GTR0 161 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 APOC4-APOC2K7ER74 178 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 KCNK3O14649 394 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 ATG13O75143 517 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 TMCC1O94876 653 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 APOC2P02655 101 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 ZNF888P0CJ79 500 aaPredicted RBP8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 COL6A2P12110 1019 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 RGRP47804 291 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 NR2C2P49116 596 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 CCR3P51677 355 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 ST8SIA6P61647 398 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 GNG11P61952 73 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 SLC20A2Q08357 652 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 SLC10A7Q0GE19 358 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 E2F5Q15329 346 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 DLG2Q15700 870 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 SMN1Q16637 294 aaKnown RBP8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 INO80DQ53TQ3 878 aaPredicted RBP8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 ODF2Q5BJF6 829 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 C9orf64Q5T6V5 341 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 RASSF3Q86WH2 238 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 SLC13A5Q86YT5 568 aaPredicted RBP8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 LRRC49Q8IUZ0 686 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 RASGEF1CQ8N431 466 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 TEX26Q8N6G2 289 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 ATP11CQ8NB49 1132 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 OR2A12Q8NGT7 310 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 ACTL9Q8TC94 416 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 CASKIN2Q8WXE0 1202 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 ISG20Q96AZ6 181 aaKnown RBP8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 HAUS1Q96CS2 278 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 ZNF599Q96NL3 588 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 QKIQ96PU8 341 aaKnown RBP eCLIP8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 LGMNQ99538 433 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 AARSD1Q9BTE6 412 aaKnown RBP8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 C11orf21Q9P2W6 132 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 UBA2Q9UBT2 640 aaPredicted RBP8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 SNX12Q9UMY4 172 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 PLA2G4CQ9UP65 541 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 HEY1Q9Y5J3 304 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 ATG2BQ96BY7 2078 aa8.84□□□□□ -0.99
CCDC90B-217ENST00000530253 TARSL2A2RTX5 802 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms