RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 ZNF605Q86T29 641 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 CCDC170Q8IYT3 715 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 RCOR2Q8IZ40 523 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 P3H4Q92791 437 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 CALR3Q96L12 384 aaKnown RBP17.57■□□□□ 0.4
CMTM1-213ENST00000529506 TEKT5Q96M29 485 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 TRIB3Q96RU7 358 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 VAT1Q99536 393 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 NUDT22Q9BRQ3 303 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 ASPSCR1Q9BZE9 553 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 TRIM5Q9C035 493 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 ZMYND15Q9H091 742 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 EPB41L1Q9H4G0 881 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.57■□□□□ 0.4
CMTM1-213ENST00000529506 NFKBIL1Q9UBC1 381 aaPredicted RBP17.57■□□□□ 0.4
CMTM1-213ENST00000529506 ALG6Q9Y672 507 aa17.57■□□□□ 0.4
CMTM1-213ENST00000529506 COL6A6A6NMZ7 2263 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 TRBV23OR9-2A0A075B6M9 112 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 PRAMEF33A0A0G2JMD5 474 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 FADS2P1A8MWK0 482 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 CST8O60676 142 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 PRAMEF10O60809 474 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 EPOP01588 193 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 CDKN2BP42772 138 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 HHEXQ03014 270 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 TBX2Q13207 712 aaPredicted RBP17.56■□□□□ 0.4
CMTM1-213ENST00000529506 PCSK7Q16549 785 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.56■□□□□ 0.4
CMTM1-213ENST00000529506 ZDHHC20Q5W0Z9 365 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 NPNTQ6UXI9 565 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 PHYKPLQ8IUZ5 450 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 TRAM1L1Q8N609 369 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 SLC37A2Q8TED4 501 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 TADA1Q96BN2 335 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 CCDC74BQ96LY2 380 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 FERMT1Q9BQL6 677 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 TRABDQ9H4I3 376 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 FAM153AQ9UHL3 310 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 SHOC2Q9UQ13 582 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 PCDHGA3Q9Y5H0 932 aa17.56■□□□□ 0.4
CMTM1-213ENST00000529506 OAS3Q9Y6K5 1087 aaKnown RBP17.56■□□□□ 0.4
CMTM1-213ENST00000529506 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.55■□□□□ 0.4
CMTM1-213ENST00000529506 VEGFDO43915 354 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 PRB1P04280 392 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 ACP5P13686 325 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 F3P13726 295 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 ATP1A2P50993 1020 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 EPHA4P54764 986 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 TAZQ16635 292 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 TFDP3Q5H9I0 405 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 NKAIN2Q5VXU1 208 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 WDR74Q6RFH5 385 aaPredicted RBP17.55■□□□□ 0.4
CMTM1-213ENST00000529506 SARM1Q6SZW1 724 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 SPOCD1Q6ZMY3 1216 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 TTC9Q92623 222 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 GLYATL1Q969I3 302 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 SGF29Q96ES7 293 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 CEP41Q9BYV8 373 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 PDP2Q9P2J9 529 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 ATXN10Q9UBB4 475 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 ZNF711Q9Y462 761 aa17.55■□□□□ 0.4
CMTM1-213ENST00000529506 MGAQ8IWI9 3026 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 HACD1B0YJ81 288 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 C9orf172C9J069 976 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 STMND1H3BQB6 276 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 AGRPO00253 132 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 KMOO15229 486 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 SNX2O60749 519 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 THRAP10827 490 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 PTPN3P26045 913 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 CYLC1P35663 651 aaPredicted RBP17.54■□□□□ 0.4
CMTM1-213ENST00000529506 ETV5P41161 510 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 RAB15P59190 212 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 PRKD1Q15139 912 aaPredicted RBP17.54■□□□□ 0.4
CMTM1-213ENST00000529506 TGIF1Q15583 401 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 PCSK4Q6UW60 755 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 ZFAND4Q86XD8 727 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 DTX1Q86Y01 620 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 KATNAL2Q8IYT4 538 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 ZNF843Q8N446 348 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 RCBTB1Q8NDN9 531 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 GPR26Q8NDV2 337 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 BRSK1Q8TDC3 778 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 RBM41Q96IZ5 413 aaKnown RBP17.54■□□□□ 0.4
CMTM1-213ENST00000529506 TEFMQ96QE5 360 aaKnown RBP17.54■□□□□ 0.4
CMTM1-213ENST00000529506 DDA1Q9BW61 102 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 OR2AG1Q9H205 316 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 HACD3Q9P035 362 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 TBC1D29Q9UFV1 150 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 KCNK6Q9Y257 313 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 PRKAB1Q9Y478 270 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 HYOU1Q9Y4L1 999 aa17.54■□□□□ 0.4
CMTM1-213ENST00000529506 B4E171 279 aa17.53■□□□□ 0.4
CMTM1-213ENST00000529506 EFSO43281 561 aa17.53■□□□□ 0.4
CMTM1-213ENST00000529506 KCNJ13O60928 360 aa17.53■□□□□ 0.4
CMTM1-213ENST00000529506 PMPCBO75439 489 aa17.53■□□□□ 0.4
CMTM1-213ENST00000529506 LCA5LO95447 670 aa17.53■□□□□ 0.4
CMTM1-213ENST00000529506 MT-CYBP00156 380 aaPredicted RBP17.53■□□□□ 0.4
CMTM1-213ENST00000529506 ITGB2P05107 769 aa17.53■□□□□ 0.4
CMTM1-213ENST00000529506 FGF3P11487 239 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms