RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 ATP13A5Q4VNC0 1218 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 C14orf28Q4W4Y0 310 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 PYCR3Q53H96 274 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 REXO1L1PQ8IX06 675 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 SLC35F6Q8N357 371 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 OR4K2Q8NGD2 314 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 WDR48Q8TAF3 677 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 PTCD2Q8WV60 388 aaKnown RBP13.25□□□□□ -0.29
CAPN1-215ENST00000528396 CCDC74AQ96AQ1 378 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 SCARF2Q96GP6 870 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-215ENST00000528396 DEPDC7Q96QD5 511 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 CCDC3Q9BQI4 270 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 RAB6BQ9NRW1 208 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 ATXN10Q9UBB4 475 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 APPL1Q9UKG1 709 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 U3KQA8 63 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 LRP4O75096 1905 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 MAP1BP46821 2468 aaKnown RBP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 GOLGA6L10A0A0M3HER8 536 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 FAM221BA6H8Z2 402 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 RHPN2P1A8MT19 583 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 PGRMC1O00264 195 aaKnown RBP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 NUAK1O60285 661 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 SNX2O60749 519 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 CDK14O94921 469 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 MT-CO3P00414 261 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 ACP5P13686 325 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 ZNF8P17098 575 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 VCLP18206 1134 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 AKT1P31749 480 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 HADHAP40939 763 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 CLDN6P56747 220 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 TMPRSS15P98073 1019 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 CCDC173Q0VFZ6 552 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 TARDBPQ13148 414 aaKnown RBP eCLIP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 CHRNA6Q15825 494 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 INSCQ1MX18 579 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 LDLRAP1Q5SW96 308 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 ZNF648Q5T619 568 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 CRTC3Q6UUV7 619 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 C4orf22Q6V702 233 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 RBM44Q6ZP01 1051 aaKnown RBP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 TRAPPC5Q8IUR0 188 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 Q8N9G6 341 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 VPS35Q96QK1 796 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 OSGEPL1Q9H4B0 414 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 STN1Q9H668 368 aaKnown RBP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 ETNK1Q9HBU6 452 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 ARNT2Q9HBZ2 717 aa13.24□□□□□ -0.29
CAPN1-215ENST00000528396 SPATS2LQ9NUQ6 558 aaKnown RBP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 DRG1Q9Y295 367 aaKnown RBP13.24□□□□□ -0.29
CAPN1-215ENST00000528396 CACNA1GO43497 2377 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 C1QTNF9BB2RNN3 333 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 UGT1A9O60656 530 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 DNAJC6O75061 913 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 MTX2O75431 263 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 PRAMEF1O95521 474 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 APRTP07741 180 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 C1QTNF9P0C862 333 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 SLC2A4P14672 509 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 ETS1P14921 441 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 GLB1P16278 677 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 TPH1P17752 444 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 UGT1A6P19224 532 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 MSH3P20585 1137 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 ITGALP20701 1170 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 UGT1A1P22309 533 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 UGT1A4P22310 534 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 UGT1A3P35503 534 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 UGT1A5P35504 534 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 GNG11P61952 73 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 BASP1P80723 227 aaKnown RBP13.23□□□□□ -0.29
CAPN1-215ENST00000528396 CDH17Q12864 832 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 LAMB3Q13751 1172 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 SPIDRQ14159 915 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 PTPRCAPQ14761 206 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 POU6F1Q14863 301 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 SIX1Q15475 284 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-215ENST00000528396 PLA2G4EQ3MJ16 856 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 PERM1Q5SV97 790 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 CERCAMQ5T4B2 595 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 KCTD11Q693B1 232 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 DRICH1Q6PGQ1 229 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-215ENST00000528396 OGFOD3Q6PK18 319 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 ADGRG6Q86SQ4 1221 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 LRRTM4Q86VH4 590 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 NRROSQ86YC3 692 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 MARCH9Q86YJ5 346 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 GPR156Q8NFN8 814 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 ZNF398Q8TD17 642 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 DTX3LQ8TDB6 740 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 DCUN1D1Q96GG9 259 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 GFM1Q96RP9 751 aaKnown RBP13.23□□□□□ -0.29
CAPN1-215ENST00000528396 ZMYND15Q9H091 742 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 ASB8Q9H765 288 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 UGT1A7Q9HAW7 530 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 UGT1A10Q9HAW8 530 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 UGT1A8Q9HAW9 530 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 KLC4Q9NSK0 619 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 PIH1D1Q9NWS0 290 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms