RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PARP6Q2NL67 630 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 ALS2CLQ60I27 953 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 IGF2-ASQ6U949 168 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 MARK2Q7KZI7 788 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZNF438Q7Z4V0 828 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 CCNJLQ8IV13 435 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 NAGSQ8N159 534 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 CCDC110Q8TBZ0 833 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 BRSK1Q8TDC3 778 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 LRRC45Q96CN5 670 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 GFM1Q96RP9 751 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 FAM118BQ9BPY3 351 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 GORASP1Q9BQQ3 440 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 FRMD8P1Q9BZ68 369 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 ARNT2Q9HBZ2 717 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 ATXN10Q9UBB4 475 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 FEZ2Q9UHY8 353 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 PKP3Q9Y446 797 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 PLEKHM1Q9Y4G2 1056 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 KIF26BQ2KJY2 2108 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 IGF2RP11717 2491 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 ADAMTS20P59510 1910 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZNF106Q9H2Y7 1883 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 A0A087WV48 116 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 RHPN2P1A8MT19 583 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 F5H423 210 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 BRINP1O60477 761 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 SLC4A1P02730 911 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 RPLP0P05388 317 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZNF8P17098 575 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 STIP1P31948 543 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 CCKBRP32239 447 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 SPAM1P38567 509 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 MLLT3P42568 568 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 EIF3IQ13347 325 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 SQSTM1Q13501 440 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 RPS6KA1Q15418 735 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 TAF1AQ15573 450 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 SEL1L2Q5TEA6 688 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 CHST15Q7LFX5 561 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 GLT6D1Q7Z4J2 308 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 SPRED1Q7Z699 444 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 ADGRG6Q86SQ4 1221 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 PHYKPLQ8IUZ5 450 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 SFTPA2Q8IWL1 248 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 SNIP1Q8TAD8 396 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 BLOC1S5Q8TDH9 187 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 FGF11Q92914 225 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 ATXN7L3BQ96GX2 97 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 LIN37Q96GY3 246 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZNF578Q96N58 590 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 TMEM74Q96NL1 305 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 ALS2CR12Q96Q35 445 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 FICDQ9BVA6 458 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 BPIFA1Q9NP55 256 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 IL26Q9NPH9 171 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 RAXQ9Y2V3 346 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 PCDHGA8Q9Y5G5 932 aa11.98□□□□□ -0.49
TRAPPC4-209ENST00000528230 CCDC187A0A096LP49 1063 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 OR5K4A6NMS3 321 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 C2orf81A6NN90 581 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 D6RAR5 112 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 KMOO15229 486 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 STX7O15400 261 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 PSMD3O43242 534 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 B4GAT1O43505 415 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 KCNJ13O60928 360 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 SLC2A4P14672 509 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 LPOP22079 712 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 FASLGP48023 281 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 PDX1P52945 283 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 MAZP56270 477 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 ERVPABLB-1P60509 514 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 GABREP78334 506 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 CCZ1BP86790 482 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 CCZ1P86791 482 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 PDE1BQ01064 536 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZFP36L1Q07352 338 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 MSLNQ13421 630 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 BIRC2Q13490 618 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 ITGA9Q13797 1035 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 P3H1Q32P28 736 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 TBC1D25Q3MII6 688 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 ATP13A5Q4VNC0 1218 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 IYDQ6PHW0 289 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 ARHGEF18Q6ZSZ5 1173 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 SLC13A5Q86YT5 568 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 Q8N9G6 341 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 FAM71DQ8N9W8 422 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 AVL9Q8NBF6 648 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 WDR36Q8NI36 951 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 RTP4Q96DX8 246 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 SLC46A1Q96NT5 459 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 STRADBQ9C0K7 418 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 OR2AG1Q9H205 316 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 TMPRSS11EQ9UL52 423 aa11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 R3HDM2Q9Y2K5 976 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 PCYT1BQ9Y5K3 369 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-209ENST00000528230 APC2O95996 2303 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms