RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NGLY1Q96IV0 654 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 PPP1R16BQ96T49 567 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 BEX2Q9BXY8 128 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 TEKT2Q9UIF3 430 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.43□□□□□ -0.42
TSKU-203ENST00000527881 RBBP6Q7Z6E9 1792 aaKnown RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 TARM1B6A8C7 271 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 MEN1O00255 615 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 CD68P34810 354 aaPredicted RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 SLC26A2P50443 739 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 SNX16P57768 344 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 EPS8Q12929 822 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 SIM2Q14190 667 aaPredicted RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 TPRG1LQ5T0D9 272 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 LARP4Q71RC2 724 aaKnown RBP eCLIP12.43□□□□□ -0.425e-6■■□□□ 12.4
TSKU-203ENST00000527881 BEND7Q8N7W2 519 aaPredicted RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 DNERQ8NFT8 737 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 IPMKQ8NFU5 416 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 RASSF5Q8WWW0 418 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 JPH3Q8WXH2 748 aaPredicted RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 TMEM125Q96AQ2 219 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 AURKBQ96GD4 344 aaPredicted RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 PPM1MQ96MI6 270 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 KAT8Q9H7Z6 458 aaKnown RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 C14orf119Q9NWQ9 140 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 LIMD1Q9UGP4 676 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 SIX4Q9UIU6 781 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 INVSQ9Y283 1065 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 LOC105371267A0A1B0GV96 52 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 UBXN8O00124 270 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 EEF2KO00418 725 aaKnown RBP12.42□□□□□ -0.42
TSKU-203ENST00000527881 HTR2BP41595 481 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 NPY2RP49146 381 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 CCSAPQ6IQ19 270 aaPredicted RBP12.42□□□□□ -0.42
TSKU-203ENST00000527881 SCIMPQ6UWF3 145 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 OTOP3Q7RTS5 596 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 LACC1Q8IV20 430 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 PNPLA1Q8N8W4 532 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 PRMT6Q96LA8 375 aaPredicted RBP12.42□□□□□ -0.42
TSKU-203ENST00000527881 CLSTN3Q9BQT9 956 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 RIBC2Q9H4K1 309 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 LOC100130705A0A1B0GUX0 176 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 JCHAINP01591 159 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 SUPT20HL2P0C7V6 817 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 CPB1P15086 417 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 PTPN3P26045 913 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 DIO3P55073 304 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 GABARAPL2P60520 117 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
TSKU-203ENST00000527881 FCHO2Q0JRZ9 810 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 SUPT20HL1Q3ZLR7 823 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 SDE2Q6IQ49 451 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 TXNDC11Q6PKC3 985 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 LYPD8Q6UX82 237 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 DCP1BQ8IZD4 617 aaKnown RBP12.42□□□□□ -0.42
TSKU-203ENST00000527881 GRPEL2Q8TAA5 225 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 NCLNQ969V3 563 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 BTN2A3PQ96KV6 586 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 SNX18Q96RF0 628 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 BBS2Q9BXC9 721 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 TRIM54Q9BYV2 358 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 BCO2Q9BYV7 579 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 FAM49AQ9H0Q0 323 aaPredicted RBP12.42□□□□□ -0.42
TSKU-203ENST00000527881 SMOC2Q9H3U7 446 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 ZBTB20Q9HC78 741 aaPredicted RBP12.42□□□□□ -0.42
TSKU-203ENST00000527881 TLR9Q9NR96 1032 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 SETD4Q9NVD3 440 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 SLAMF8Q9P0V8 285 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 C3orf18Q9UK00 162 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 INTS6Q9UL03 887 aaKnown RBP12.42□□□□□ -0.42
TSKU-203ENST00000527881 TPRKBQ9Y3C4 175 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 MAU2Q9Y6X3 613 aa12.42□□□□□ -0.42
TSKU-203ENST00000527881 C12orf71A8MTZ7 269 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 DPYSL4O14531 572 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 BCKDKO14874 412 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 FAM20BO75063 409 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 CPNE3O75131 537 aaKnown RBP12.41□□□□□ -0.42
TSKU-203ENST00000527881 UBL4AP11441 157 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 LBPP18428 481 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 EFNA5P52803 228 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 CDH17Q12864 832 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 CLCA4Q14CN2 919 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 ACAP2Q15057 778 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 TBRG1Q3YBR2 411 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 EEF1DP3Q658K8 133 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 RAP1GAP2Q684P5 730 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 C8orf82Q6P1X6 216 aaPredicted RBP12.41□□□□□ -0.42
TSKU-203ENST00000527881 LCLAT1Q6UWP7 414 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 GDPD3Q7L5L3 318 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 HCAR2Q8TDS4 363 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 AMBRA1Q9C0C7 1298 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 B4GALT5O43286 388 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 ARNTP27540 789 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 ARL2P36404 184 aa12.41□□□□□ -0.42
TSKU-203ENST00000527881 CLCNKBP51801 687 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms