RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 LIMD1Q9UGP4 676 aa20.35■□□□□ 0.85
SMCO4-203ENST00000526869 GNPTGQ9UJJ9 305 aa20.35■□□□□ 0.85
SMCO4-203ENST00000526869 PIAS3Q9Y6X2 628 aa20.35■□□□□ 0.85
SMCO4-203ENST00000526869 OR1I1O60431 355 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 SNX3O60493 162 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 RNASEH1O60930 286 aaKnown RBP20.34■□□□□ 0.85
SMCO4-203ENST00000526869 ADH1BP00325 375 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 SERPINE1P05121 402 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 ELFN1P0C7U0 828 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 MYL2P10916 166 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 UGT1A6P19224 532 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 UGT1A1P22309 533 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 UGT1A4P22310 534 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 NTSR1P30989 418 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 UGT1A3P35503 534 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 UGT1A5P35504 534 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 PSMD8P48556 350 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 IRX4P78413 519 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 CREB5Q02930 508 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 CSHL1Q14406 222 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 POM121L1PQ3SYA9 428 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 TECRLQ5HYJ1 363 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 MACC1Q6ZN28 852 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 FAM47EQ6ZV65 393 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 ZNF765Q7L2R6 523 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 MMAAQ8IVH4 418 aaKnown RBP20.34■□□□□ 0.85
SMCO4-203ENST00000526869 NKAPQ8N5F7 415 aaKnown RBP20.34■□□□□ 0.85
SMCO4-203ENST00000526869 OR6Y1Q8NGX8 325 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 HLA-CQ95604 372 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 COQ10AQ96MF6 247 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 C7orf26Q96N11 449 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 ZSCAN5AQ9BUG6 496 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 TSSK1BQ9BXA7 367 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 XPR1Q9UBH6 696 aa20.34■□□□□ 0.85
SMCO4-203ENST00000526869 TRMT6Q9UJA5 497 aaKnown RBP20.34■□□□□ 0.85
SMCO4-203ENST00000526869 C5orf42Q9H799 3197 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 GPR39O43194 453 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 AP1G1O43747 822 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 SYNCRIPO60506 623 aaKnown RBP20.33■□□□□ 0.85
SMCO4-203ENST00000526869 SNNO75324 88 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-203ENST00000526869 SBK3P0C264 359 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 FGF3P11487 239 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-203ENST00000526869 NSG1P42857 185 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 PGGT1BP53609 377 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 BST1Q10588 318 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 ASPHQ12797 758 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 GRSF1Q12849 480 aaKnown RBP eCLIP20.33■□□□□ 0.851e-10■■□□□ 14.5
SMCO4-203ENST00000526869 SKIV2LQ15477 1246 aaKnown RBP20.33■□□□□ 0.85
SMCO4-203ENST00000526869 LEXMQ3ZCV2 418 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 ATP13A5Q4VNC0 1218 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 SETMARQ53H47 684 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-203ENST00000526869 HENMT1Q5T8I9 393 aaKnown RBP20.33■□□□□ 0.85
SMCO4-203ENST00000526869 SDE2Q6IQ49 451 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 TMEM207Q6UWW9 146 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 RFLNAQ6ZTI6 216 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 ZNF771Q7L3S4 317 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-203ENST00000526869 C10orf107Q8IVU9 208 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 CACNA2D3Q8IZS8 1091 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 ANKRD49Q8WVL7 239 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 SEC16BQ96JE7 1060 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 CDX2Q99626 313 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-203ENST00000526869 COPS8Q99627 209 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 GPR21Q99679 349 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 DERL2Q9GZP9 239 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 SLCO1B3Q9NPD5 702 aa20.33■□□□□ 0.85
SMCO4-203ENST00000526869 PLXNB3Q9ULL4 1909 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 TK2O00142 265 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 WNT9AO14904 365 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 DNAJC6O75061 913 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 NIPSNAP2O75323 286 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 TGDSO95455 350 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 C7P10643 843 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 RALBP11234 206 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 C5AR1P21730 350 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 KCNA4P22459 653 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 P2RY2P41231 377 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 LIG3P49916 1009 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 METAP1P53582 386 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 ATP6V0D1P61421 351 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 MRPS21P82921 87 aaKnown RBP20.32■□□□□ 0.84
SMCO4-203ENST00000526869 CCDC15Q0P6D6 951 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 STX3Q13277 289 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 STARD3Q14849 445 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 CST6Q15828 149 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 CCDC85BQ15834 202 aaPredicted RBP20.32■□□□□ 0.84
SMCO4-203ENST00000526869 ZSCAN26Q16670 478 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 ZNF284Q2VY69 593 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 PRPF38BQ5VTL8 546 aaKnown RBP20.32■□□□□ 0.84
SMCO4-203ENST00000526869 ZNF776Q68DI1 518 aaPredicted RBP20.32■□□□□ 0.84
SMCO4-203ENST00000526869 PTRHD1Q6GMV3 140 aaKnown RBP20.32■□□□□ 0.84
SMCO4-203ENST00000526869 Q6ZVL8 140 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 OTOAQ7RTW8 1153 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 SPATA21Q7Z572 469 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 SPATS2Q86XZ4 545 aaKnown RBP20.32■□□□□ 0.84
SMCO4-203ENST00000526869 CCDC197Q8NCU1 140 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 OR2T3Q8NH03 318 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 PPP1R14CQ8TAE6 165 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 CCDC126Q96EE4 140 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 DTD2Q96FN9 168 aa20.32■□□□□ 0.84
SMCO4-203ENST00000526869 VPS35Q96QK1 796 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms