RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 SH3BP2P78314 561 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 IHHQ14623 411 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 TEX26Q8N6G2 289 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 AVL9Q8NBF6 648 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 ANKRD20A12PQ8NF67 263 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 STAMBPL1Q96FJ0 436 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 WDR24Q96S15 920 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 POLR1EQ9GZS1 481 aaKnown RBP13.67□□□□□ -0.22
CSTF3-206ENST00000524827 RMI1Q9H9A7 625 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 TLK1Q9UKI8 766 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 DNPEPQ9ULA0 475 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 CHKBQ9Y259 395 aa13.67□□□□□ -0.22
CSTF3-206ENST00000524827 CDC14CA4D256 554 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 OR5K4A6NMS3 321 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 NDUFA10O95299 355 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 TYRP1P17643 537 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 GNLYP22749 145 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 SEPHS1P49903 392 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 DSC2Q02487 901 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 ITKQ08881 620 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 HENMT1Q5T8I9 393 aaKnown RBP13.66□□□□□ -0.22
CSTF3-206ENST00000524827 ALG1LQ6GMV1 187 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 CAPRIN2Q6IMN6 1127 aaKnown RBP13.66□□□□□ -0.22
CSTF3-206ENST00000524827 PHYKPLQ8IUZ5 450 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 RASGRP3Q8IV61 690 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 RAVER1Q8IY67 606 aaKnown RBP13.66□□□□□ -0.22
CSTF3-206ENST00000524827 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.66□□□□□ -0.22
CSTF3-206ENST00000524827 ZNF653Q96CK0 615 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 TGM7Q96PF1 710 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 PLEKHG4BQ96PX9 1271 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 OR6C1Q96RD1 312 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 TDRD1Q9BXT4 1180 aaKnown RBP13.66□□□□□ -0.22
CSTF3-206ENST00000524827 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 ZNF768Q9H5H4 540 aaKnown RBP13.66□□□□□ -0.22
CSTF3-206ENST00000524827 UCK1Q9HA47 277 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 LNPEPQ9UIQ6 1025 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 KCND3Q9UK17 655 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 SCINQ9Y6U3 715 aa13.66□□□□□ -0.22
CSTF3-206ENST00000524827 GRID2O43424 1007 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 NUAK1O60285 661 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 VPS4BO75351 444 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 CREG1O75629 220 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 UBXN7O94888 489 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 PRLP01236 227 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 FTLP02792 175 aaPredicted RBP13.65□□□□□ -0.22
CSTF3-206ENST00000524827 RARAP10276 462 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 LEPRP48357 1165 aaKnown RBP13.65□□□□□ -0.22
CSTF3-206ENST00000524827 SPINT3P49223 89 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 DNASE1L3Q13609 305 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 IL11RAQ14626 422 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 BOLA3Q53S33 107 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 FHL5Q5TD97 284 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 TXNRD3NBQ6F5E7 133 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 TMEM26Q6ZUK4 368 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 APTXQ7Z2E3 356 aaKnown RBP13.65□□□□□ -0.22
CSTF3-206ENST00000524827 EFCAB3Q8N7B9 438 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 GALNT11Q8NCW6 608 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 LPCAT1Q8NF37 534 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 ELMO2Q96JJ3 720 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 LYSMD1Q96S90 227 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 CARD9Q9H257 536 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 OSGEPL1Q9H4B0 414 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 FAM83DQ9H4H8 585 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 PCDH18Q9HCL0 1135 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 KLC4Q9NSK0 619 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 SCHIP1Q9P0W5 487 aaPredicted RBP13.65□□□□□ -0.22
CSTF3-206ENST00000524827 VPS4AQ9UN37 437 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 TTLL3Q9Y4R7 772 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 PCDHGA6Q9Y5G7 932 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 SLC30A1Q9Y6M5 507 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 ITPR2Q14571 2701 aa13.65□□□□□ -0.22
CSTF3-206ENST00000524827 TNRC6AQ8NDV7 1962 aaKnown RBP13.65□□□□□ -0.22
CSTF3-206ENST00000524827 ESPL1Q14674 2120 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 SHANK1Q9Y566 2161 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 C1orf232A0A0U1RR37 186 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 PIPSLA2A3N6 862 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 GOLGA6L3A6NEY3 463 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 TTLL8A6PVC2 850 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 TOX3O15405 576 aaPredicted RBP13.64□□□□□ -0.23
CSTF3-206ENST00000524827 MFSD11O43934 449 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 RASSF9O75901 435 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 DNAJB5O75953 348 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 FGF5P12034 268 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 ZNF8P17098 575 aaPredicted RBP13.64□□□□□ -0.23
CSTF3-206ENST00000524827 CASP14P31944 242 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 GARSP41250 739 aaKnown RBP13.64□□□□□ -0.23
CSTF3-206ENST00000524827 CLCNKAP51800 687 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 ZNF571Q7Z3V5 609 aaPredicted RBP13.64□□□□□ -0.23
CSTF3-206ENST00000524827 LRRC49Q8IUZ0 686 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 APLFQ8IW19 511 aaPredicted RBP13.64□□□□□ -0.23
CSTF3-206ENST00000524827 TRIM48Q8IWZ4 208 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 AOPEPQ8N6M6 819 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 CPT1CQ8TCG5 803 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 CT55Q8WUE5 264 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 MAML1Q92585 1016 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 TRIM55Q9BYV6 548 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 ARFGAP3Q9NP61 516 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 PKD2L2Q9NZM6 624 aa13.64□□□□□ -0.23
CSTF3-206ENST00000524827 RCOR3Q9P2K3 495 aaPredicted RBP13.64□□□□□ -0.23
CSTF3-206ENST00000524827 ATXN10Q9UBB4 475 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms