RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 ECHS1P30084 290 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 ACTN2P35609 894 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 TLE3Q04726 772 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 ENPEPQ07075 957 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 MLC1Q15049 377 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 EDRF1Q3B7T1 1238 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 ZCWPW2Q504Y3 356 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 MS4A13Q5J8X5 152 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 MPP7Q5T2T1 576 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 ARHGAP40Q5TG30 622 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 NAPEPLDQ6IQ20 393 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 LCLAT1Q6UWP7 414 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 KRBA2Q6ZNG9 492 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 LCNL1Q6ZST4 164 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 TAC4Q86UU9 113 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 ZNF843Q8N446 348 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 SLC35F5Q8WV83 523 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 IRGQQ8WZA9 623 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 KAT5Q92993 513 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 HDAC10Q969S8 669 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 NEIL1Q96FI4 390 aaPredicted RBP5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 SERPINB11Q96P15 392 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 KCNC2Q96PR1 638 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 C12orf65Q9H3J6 166 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 GOLPH3LQ9H4A5 285 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 SEC61A2Q9H9S3 476 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 COX16Q9P0S2 106 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 HPSEQ9Y251 543 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 PCDHB1Q9Y5F3 818 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 TMEM131Q92545 1883 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 KNTC1P50748 2209 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 HELZ2Q9BYK8 2649 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 TRIM49BA6NDI0 452 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 GOLGA6CA6NDK9 693 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 GOLGA6BA6NDN3 693 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 F5H5T6 163 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 SLC16A3O15427 465 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 MAGEC1O60732 1142 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 USP12O75317 370 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ENDOD1O94919 500 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ZNF202O95125 648 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 GASTP01350 101 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 PAEPP09466 180 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 GOLGA6DP0CG33 693 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 THEGLP0DJG4 465 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 KRT10P13645 584 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 KRT5P13647 590 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 PRLRP16471 622 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 TBXAS1P24557 533 aaPredicted RBP5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 DRD3P35462 400 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 PRCPP42785 496 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 RXRGP48443 463 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 CFHR1Q03591 330 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 DUSP2Q05923 314 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 CNTN1Q12860 1018 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ILKQ13418 452 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 PNOCQ13519 176 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ELAVL3Q14576 367 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 CNGA2Q16280 664 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 MST1LQ2TV78 715 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 TBC1D25Q3MII6 688 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 SETMARQ53H47 684 aaPredicted RBP5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 SFMBT2Q5VUG0 894 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 FAM46CQ5VWP2 391 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 SYPL2Q5VXT5 272 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ANKRD40Q6AI12 368 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 Q6ZVL8 140 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 RRAGAQ7L523 313 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 DSG4Q86SJ6 1040 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 C14orf80Q86SX3 495 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ERICH1Q86X53 443 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 CMTM4Q8IZR5 234 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 SCML4Q8N228 414 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 PRR18Q8N4B5 295 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 KDM1BQ8NB78 822 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ZNF480Q8WV37 535 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 OR8D1Q8WZ84 308 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 CFHR4Q92496 578 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 AZIN2Q96A70 460 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 CLIP3Q96DZ5 547 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 NT5C1BQ96P26 610 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 SPAG5Q96R06 1193 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 LMF1Q96S06 567 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 GPHA2Q96T91 129 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ZSWIM1Q9BR11 485 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 CALN1Q9BXU9 219 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ZCCHC4Q9H5U6 513 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 FAM204AQ9H8W3 233 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 BCO1Q9HAY6 547 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 CPNE5Q9HCH3 593 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 FZD3Q9NPG1 666 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 GOLGA6AQ9NYA3 693 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 ARMCX3Q9UH62 379 aaPredicted RBP5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 CYTH4Q9UIA0 394 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 SLC25A13Q9UJS0 675 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 SARDHQ9UL12 918 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 KIAA1257Q9ULG3 409 aa5.36□□□□□ -1.55
CTNNA1-239ENST00000523685 DUSP10Q9Y6W6 482 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms