RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ATCAYQ86WG3 371 aa25.62■■□□□ 1.69
PVT1-219ENST00000523427 PHYKPLQ8IUZ5 450 aa25.62■■□□□ 1.69
PVT1-219ENST00000523427 AOPEPQ8N6M6 819 aa25.62■■□□□ 1.69
PVT1-219ENST00000523427 PLEKHG4BQ96PX9 1271 aa25.62■■□□□ 1.69
PVT1-219ENST00000523427 WDR24Q96S15 920 aa25.62■■□□□ 1.69
PVT1-219ENST00000523427 TDRD1Q9BXT4 1180 aaKnown RBP25.62■■□□□ 1.69
PVT1-219ENST00000523427 PCDH9Q9HC56 1237 aa25.62■■□□□ 1.69
PVT1-219ENST00000523427 KCTD3Q9Y597 815 aa25.62■■□□□ 1.69
PVT1-219ENST00000523427 UTP20O75691 2785 aaKnown RBP25.62■■□□□ 1.69
PVT1-219ENST00000523427 SPTAN1Q13813 2472 aaKnown RBP25.62■■□□□ 1.69
PVT1-219ENST00000523427 KIR2DS5A0A0G2JLQ3 304 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 A0A0G2JNG1 304 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 CLEC18AA5D8T8 446 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 A6NCN8 305 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 KIR2DS3K7RE56 304 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 GRID2O43424 1007 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 CD48P09326 243 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 AMD1P17707 334 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 GJC1P36383 396 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 ZNF165P49910 485 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 KIR2DS5Q14953 304 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 PLA2G4EQ3MJ16 856 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 C4orf17Q53FE4 359 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 C6orf15Q6UXA7 325 aaPredicted RBP25.61■■□□□ 1.69
PVT1-219ENST00000523427 CLEC18BQ6UXF7 455 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 RASGRP3Q8IV61 690 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 CLEC18CQ8NCF0 446 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 MIB2Q96AX9 1013 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 TRIM11Q96F44 468 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 C9orf72Q96LT7 481 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 OR6C1Q96RD1 312 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 LRRC4CQ9HCJ2 640 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 KLC4Q9NSK0 619 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 SIDT1Q9NXL6 827 aaKnown RBP25.61■■□□□ 1.69
PVT1-219ENST00000523427 DNPEPQ9ULA0 475 aa25.61■■□□□ 1.69
PVT1-219ENST00000523427 USP9XQ93008 2570 aaPredicted RBP25.6■■□□□ 1.69
PVT1-219ENST00000523427 TEX15Q9BXT5 2789 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 MKRN2OSH3BPM6 223 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 PRLP01236 227 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 KRT7P08729 469 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 FURINP09958 794 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 MYBL1P10243 752 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 GARSP41250 739 aaKnown RBP25.6■■□□□ 1.69
PVT1-219ENST00000523427 SPINT3P49223 89 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 NIPAL4Q0D2K0 466 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 PIGHQ14442 188 aaPredicted RBP25.6■■□□□ 1.69
PVT1-219ENST00000523427 HIST2H2BCQ6DN03 193 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 CRTC3Q6UUV7 619 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 RBM43Q6ZSC3 357 aaKnown RBP25.6■■□□□ 1.69
PVT1-219ENST00000523427 TMEM135Q86UB9 458 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 TRIM48Q8IWZ4 208 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 STAMBPL1Q96FJ0 436 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 OR2AG1Q9H205 316 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 RMI1Q9H9A7 625 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 PKD2L2Q9NZM6 624 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 SCHIP1Q9P0W5 487 aaPredicted RBP25.6■■□□□ 1.69
PVT1-219ENST00000523427 ATXN10Q9UBB4 475 aa25.6■■□□□ 1.69
PVT1-219ENST00000523427 CDC14CA4D256 554 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 OR5K4A6NMS3 321 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 RASSF9O75901 435 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 KIAA0754O94854 1291 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 ZNF8P17098 575 aaPredicted RBP25.59■■□□□ 1.69
PVT1-219ENST00000523427 CA4P22748 312 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 IL4RP24394 825 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 SEPT7Q16181 437 aaKnown RBP25.59■■□□□ 1.69
PVT1-219ENST00000523427 ANKRD20A8PQ5CZ79 823 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 ALS2CLQ60I27 953 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 ASB18Q6ZVZ8 466 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 TEKT4Q8WW24 435 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 PSMG3-AS1Q96PY0 264 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 EPB41L1Q9H4G0 881 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 OGFRQ9NZT2 677 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 LNPEPQ9UIQ6 1025 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 DNAJC16Q9Y2G8 782 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 SLC30A1Q9Y6M5 507 aa25.59■■□□□ 1.69
PVT1-219ENST00000523427 NOTCH2Q04721 2471 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 MATN3O15232 486 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 NUAK1O60285 661 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 VIPP01282 170 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 SLC4A1P02730 911 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 HLA-DQB2P05538 268 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 LEPRP48357 1165 aaKnown RBP25.58■■□□□ 1.69
PVT1-219ENST00000523427 GALNT2Q10471 571 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 MAP7Q14244 749 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 TDRD12Q587J7 1177 aaKnown RBP25.58■■□□□ 1.69
PVT1-219ENST00000523427 HENMT1Q5T8I9 393 aaKnown RBP25.58■■□□□ 1.69
PVT1-219ENST00000523427 LRRC49Q8IUZ0 686 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 ARRDC2Q8TBH0 407 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 CCHCR1Q8TD31 782 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 CARD9Q9H257 536 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 RTN4Q9NQC3 1192 aaKnown RBP25.58■■□□□ 1.69
PVT1-219ENST00000523427 AIPL1Q9NZN9 384 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 POLHQ9Y253 713 aa25.58■■□□□ 1.69
PVT1-219ENST00000523427 MN1Q10571 1320 aaPredicted RBP25.58■■□□□ 1.69
PVT1-219ENST00000523427 PIPSLA2A3N6 862 aa25.57■■□□□ 1.68
PVT1-219ENST00000523427 LILRA5A6NI73 299 aa25.57■■□□□ 1.68
PVT1-219ENST00000523427 UBXN7O94888 489 aa25.57■■□□□ 1.68
PVT1-219ENST00000523427 NDUFA10O95299 355 aa25.57■■□□□ 1.68
PVT1-219ENST00000523427 CES1P23141 567 aa25.57■■□□□ 1.68
PVT1-219ENST00000523427 UBE2IP63279 158 aaKnown RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms