RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 ZNF648Q5T619 568 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-223ENST00000523125 NKAIN2Q5VXU1 208 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 ALS2CLQ60I27 953 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 PCSK4Q6UW60 755 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 BBS12Q6ZW61 710 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 DAAM2Q86T65 1068 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 GAS2L3Q86XJ1 694 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 SFRP1Q8N474 314 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 SNRNP27Q8WVK2 155 aaKnown RBP12.25□□□□□ -0.45
VEGFA-223ENST00000523125 HAUS1Q96CS2 278 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 CCDC97Q96F63 343 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-223ENST00000523125 OXNAD1Q96HP4 312 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-223ENST00000523125 QKIQ96PU8 341 aaKnown RBP eCLIP12.25□□□□□ -0.45
VEGFA-223ENST00000523125 ANP32EQ9BTT0 268 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 SPATA16Q9BXB7 569 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 HEMGNQ9BXL5 484 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 GPR63Q9BZJ6 419 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 CARD9Q9H257 536 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 TRIM39Q9HCM9 518 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 ACSL6Q9UKU0 697 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 TMPRSS11EQ9UL52 423 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 PCDHA3Q9Y5H8 950 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 FASNP49327 2511 aaKnown RBP12.25□□□□□ -0.45
VEGFA-223ENST00000523125 TEX51A0A1B0GUA7 166 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 CHUKO15111 745 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 NVLO15381 856 aaKnown RBP12.24□□□□□ -0.45
VEGFA-223ENST00000523125 EFSO43281 561 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 MTSS1O43312 755 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 SLC25A14O95258 325 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-223ENST00000523125 EPOP01588 193 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 SLC4A1P02730 911 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 JMJD7P0C870 316 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 ZNF8P17098 575 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-223ENST00000523125 CSF2RBP32927 897 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 CTNNA1P35221 906 aaKnown RBP12.24□□□□□ -0.45
VEGFA-223ENST00000523125 UCNP55089 124 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 TMPRSS3P57727 454 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 KHDC1Q4VXA5 237 aaKnown RBP12.24□□□□□ -0.45
VEGFA-223ENST00000523125 SIRPB2Q5JXA9 342 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 PHF19Q5T6S3 580 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 BROXQ5VW32 411 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 IYDQ6PHW0 289 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 RAD9BQ6WBX8 426 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 ADGRG6Q86SQ4 1221 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 ZNF761Q86XN6 746 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-223ENST00000523125 TMTC1Q8IUR5 882 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 CCDC50Q8IVM0 306 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 TTC30BQ8N4P2 665 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 TRAM1L1Q8N609 369 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 HTR3CQ8WXA8 447 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 GLYATL1Q969I3 302 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 TMEM159Q96B96 161 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 RBM41Q96IZ5 413 aaKnown RBP12.24□□□□□ -0.45
VEGFA-223ENST00000523125 MRGPRX2Q96LB1 330 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 FCRL5Q96RD9 977 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 GORASP1Q9BQQ3 440 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 ZSCAN5AQ9BUG6 496 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 LACRTQ9GZZ8 138 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 OR2AG1Q9H205 316 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 C10orf88Q9H8K7 445 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 RAD18Q9NS91 495 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 PISDQ9UG56 409 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 FAM153AQ9UHL3 310 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 KCNK6Q9Y257 313 aa12.24□□□□□ -0.45
VEGFA-223ENST00000523125 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.24□□□□□ -0.45
VEGFA-223ENST00000523125 BOD1L1Q8NFC6 3051 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 GCN1Q92616 2671 aaKnown RBP12.23□□□□□ -0.45
VEGFA-223ENST00000523125 PRAMEF33A0A0G2JMD5 474 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 PRR19A6NJB7 356 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 BTNL10A8MVZ5 291 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 HACD1B0YJ81 288 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 F5H423 210 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-223ENST00000523125 ATXN7O15265 892 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-223ENST00000523125 GRID2O43424 1007 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 PRAMEF10O60809 474 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 CCL4P13236 92 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 ACP5P13686 325 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 HMGCLP35914 325 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 CHRNA4P43681 627 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 CLCNKAP51800 687 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 LIMK2P53671 638 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 COPS2P61201 443 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 XRCC4Q13426 336 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 TGIF1Q15583 401 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 ZNF569Q5MCW4 686 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 ARHGAP40Q5TG30 622 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 PDPK2PQ6A1A2 396 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 CCDC70Q6NSX1 233 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 PID1Q7Z2X4 250 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 JAMLQ86YT9 394 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 LRRC57Q8N9N7 239 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 RCBTB1Q8NDN9 531 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 OR4D9Q8NGE8 314 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 USP7Q93009 1102 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 CCDC74BQ96LY2 380 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 PLEKHG4BQ96PX9 1271 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
VEGFA-223ENST00000523125 VAT1Q99536 393 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 CMKLR1Q99788 373 aa12.23□□□□□ -0.45
VEGFA-223ENST00000523125 BPIFA1Q9NP55 256 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms