RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CHRNA4P43681 627 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 LLGL1Q15334 1064 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 CERCAMQ5T4B2 595 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 PACS1Q6VY07 963 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 ZNF572Q7Z3I7 529 aaPredicted RBP9.36□□□□□ -0.91
CLK4-209ENST00000521621 SNX20Q7Z614 316 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 GALNT13Q8IUC8 556 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 RBFAQ8N0V3 343 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 NAPGQ99747 312 aaPredicted RBP9.36□□□□□ -0.91
CLK4-209ENST00000521621 CCDC188H7C350 402 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 QSOX1O00391 747 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 AP2A2O94973 939 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 EPHA4P54764 986 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 ITIH4Q14624 930 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 KCNJ11Q14654 390 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.36□□□□□ -0.91
CLK4-209ENST00000521621 LRRC8BQ6P9F7 803 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
CLK4-209ENST00000521621 ZFPM2Q8WW38 1151 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 GATA6Q92908 595 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 NRSN2Q9GZP1 204 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 CARS2Q9HA77 564 aaKnown RBP9.36□□□□□ -0.91
CLK4-209ENST00000521621 CYP4F12Q9HCS2 524 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 ATXN10Q9UBB4 475 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 PADI4Q9UM07 663 aa9.36□□□□□ -0.91
CLK4-209ENST00000521621 OAS3Q9Y6K5 1087 aaKnown RBP9.36□□□□□ -0.91
CLK4-209ENST00000521621 KIR2DS5A0A0G2JLQ3 304 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 A0A0G2JNG1 304 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 C17orf113A0A1B0GUU1 675 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 KIR2DS3K7RE56 304 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SRP72O76094 671 aaKnown RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 CAMK2BQ13554 666 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 KIR2DS5Q14953 304 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SKIDA1Q1XH10 827 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 ABRAXAS1Q6UWZ7 409 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 LRRTM4Q86VH4 590 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SLC35F3Q8IY50 421 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 MPP5Q8N3R9 675 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SLC25A41Q8N5S1 370 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 PDCD7Q8N8D1 485 aaKnown RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 TMEM159Q96B96 161 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 FAM118BQ9BPY3 351 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 IL22Q9GZX6 179 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 TMEM168Q9H0V1 697 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 CD84Q9UIB8 345 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 PYCARDQ9ULZ3 195 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 MAGEB16A2A368 324 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 GRID2O43424 1007 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 OPA1O60313 960 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 XRCC1P18887 633 aaPredicted RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 MAGEA3P43357 314 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SARNPP82979 210 aaKnown RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 CTBSQ01459 385 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 NFATC2Q13469 925 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 RTP5Q14D33 572 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 ZNF658BQ4V348 819 aaPredicted RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 ATP13A5Q4VNC0 1218 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 PRAMEF14Q5SWL7 426 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 DENND2CQ68D51 928 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 TTC27Q6P3X3 843 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 CERS6Q6ZMG9 384 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 C11orf96Q7Z7L8 435 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 HOOK3Q86VS8 718 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 CREG2Q8IUH2 290 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 ZNF398Q8TD17 642 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 BLOC1S5Q8TDH9 187 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SARS2Q9NP81 518 aaKnown RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 TAAR2Q9P1P5 351 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SHOC2Q9UQ13 582 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 ASCC3Q8N3C0 2202 aaKnown RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 CTAGE9A4FU28 777 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SDC3O75056 442 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SLC25A14O95258 325 aaPredicted RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 ZNF8P17098 575 aaPredicted RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 INSM1Q01101 510 aaPredicted RBP9.35□□□□□ -0.91
CLK4-209ENST00000521621 CACNG1Q06432 222 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 PTK6Q13882 451 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 CHRNA6Q15825 494 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 PCID2Q5JVF3 399 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 PCGF5Q86SE9 256 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 IFI44Q8TCB0 444 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SH3KBP1Q96B97 665 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 DEPDC7Q96QD5 511 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 KIFC1Q9BW19 673 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 RAB6BQ9NRW1 208 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 TCAF1Q9Y4C2 921 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 SAR1BQ9Y6B6 198 aa9.35□□□□□ -0.91
CLK4-209ENST00000521621 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLK4-209ENST00000521621 USP27XA6NNY8 438 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 F8W8V4 182 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 DXOO77932 396 aaKnown RBP9.34□□□□□ -0.91
CLK4-209ENST00000521621 ZNF7P17097 686 aaPredicted RBP9.34□□□□□ -0.91
CLK4-209ENST00000521621 VCLP18206 1134 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 ITGALP20701 1170 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 GNPDA1P46926 289 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 DAB2P98082 770 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 B4GALNT1Q00973 533 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 TMEM115Q12893 351 aaPredicted RBP9.34□□□□□ -0.91
CLK4-209ENST00000521621 DEFB133Q30KQ1 61 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 ZNF542PQ5EBM4 170 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms