RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 IFRD2Q12894 506 aaPredicted RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 TAF10Q12962 218 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 CUL4BQ13620 913 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 NR1D2Q14995 579 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 SURF1Q15526 300 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 ZBTB6Q15916 424 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 KNOP1Q1ED39 458 aaKnown RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 SERTAD4-AS1Q5TG53 156 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 AGBL4Q5VU57 503 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 AGAP7PQ5VUJ5 663 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 E4F1Q66K89 784 aaPredicted RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 C20orf204Q6ZNR8 217 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 DENND5BQ6ZUT9 1274 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 LHFPL2Q6ZUX7 228 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 MAEAQ7L5Y9 396 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 HS2ST1Q7LGA3 356 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 DYMQ7RTS9 669 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 TAS1R3Q7RTX0 852 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 ADIPOR2Q86V24 386 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 HORMAD1Q86X24 394 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 RELL1Q8IUW5 271 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 MCATQ8IVS2 390 aaKnown RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 SCUBE1Q8IWY4 988 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 GUF1Q8N442 669 aaKnown RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 ENDOVQ8N8Q3 282 aaKnown RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 KDM1BQ8NB78 822 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 ADAMTS16Q8TE57 1224 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 TMEM171Q8WVE6 324 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 FAXDC2Q96IV6 333 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 SPATA17Q96L03 361 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 AGAP4Q96P64 663 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 DPYSL5Q9BPU6 564 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC2A11Q9BYW1 496 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 EDEM3Q9BZQ6 932 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 TSPAN10Q9H1Z9 355 aaPredicted RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 CHST8Q9H2A9 424 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 GOLPH3LQ9H4A5 285 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 EXOC1Q9NV70 894 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 DMAC2Q9NW81 257 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 SIDT1Q9NXL6 827 aaKnown RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 CPSF3Q9UKF6 684 aaKnown RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 DSEQ9UL01 958 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 ACSL5Q9ULC5 683 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 TRAF3IP3Q9Y228 551 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 C2CD2Q9Y426 696 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 V9GYY5 206 aaPredicted RBP3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 NUP210LQ5VU65 1888 aa3.13□□□□□ -1.91
SCARNA13-201ENST00000516672 MALRD1Q5VYJ5 2156 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 LOC100289279A0A1B0GTE1 492 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 TTC26A0AVF1 554 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 TRIM49BA6NDI0 452 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF233A6NK53 670 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC22A31A6NKX4 558 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 RHPN2P1A8MT19 583 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 SYT5O00445 386 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 PSMA7O14818 248 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 SMAD9O15198 467 aaKnown RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 PMM2O15305 246 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 RAD51BO15315 384 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CALUO43852 315 aaPredicted RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ERN1O75460 977 aaKnown RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 SPAG6O75602 509 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 PALMO75781 387 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 GCNT3O95395 438 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 FGFR1OPO95684 399 aaKnown RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 NUDT17P0C025 328 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CTSEP14091 401 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 BMP6P22004 513 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ERCC5P28715 1186 aaPredicted RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 HLA-FP30511 346 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 GTF2H1P32780 548 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 PNPLA4P41247 253 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 HNRNPH2P55795 449 aaKnown RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 PFN3P60673 137 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 TSPY1Q01534 308 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 LRRC63Q05C16 580 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 PPP2R3AQ06190 1150 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CACNG1Q06432 222 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CNTN1Q12860 1018 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 STK4Q13043 487 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 IFT88Q13099 833 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 STIM1Q13586 685 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ETFDHQ16134 617 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF568Q3ZCX4 644 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CFAP221Q4G0U5 840 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 KRTCAP3Q53RY4 240 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 HECTD3Q5T447 861 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF658Q5TYW1 1059 aaPredicted RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 NEK5Q6P3R8 708 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 Q6ZNB5 142 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 LINC00696Q6ZRV3 163 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CHST9Q7L1S5 443 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CD163Q86VB7 1156 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 METTL23Q86XA0 190 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 RAB43Q86YS6 212 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 LIX1LQ8IVB5 337 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CCDC117Q8IWD4 279 aaPredicted RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 LRRC8AQ8IWT6 810 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 REXO1L1PQ8IX06 675 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms