RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 PPANQ9NQ55 473 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIM36Q9NQ86 728 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TCF7L2Q9NQB0 619 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FSCN3Q9NQT6 498 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ASAH2Q9NR71 780 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SERINC1Q9NRX5 453 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC22A11Q9NSA0 550 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RRP7BPQ9NSQ0 103 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC35D1Q9NTN3 355 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SERTAD4Q9NUC0 356 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FBXO28Q9NVF7 368 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARL8BQ9NVJ2 186 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 THAP1Q9NVV9 213 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNHIT6Q9NWK9 470 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 NMRK1Q9NWW6 199 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ASB6Q9NWX5 421 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZDHHC7Q9NXF8 308 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 GDAP2Q9NXN4 497 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 UTP6Q9NYH9 597 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CYP39A1Q9NYL5 469 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 WSB2Q9NYS7 404 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PLK2Q9NYY3 685 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ERAP1Q9NZ08 941 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 GDE1Q9NZC3 331 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 IL1RAPL1Q9NZN1 696 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 NCKIPSDQ9NZQ3 722 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMOD2Q9NZR1 351 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RAI14Q9P0K7 980 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 C6orf203Q9P0P8 240 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SEPT10Q9P0V9 454 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 DLGAP2Q9P1A6 1054 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 COPG2Q9UBF2 871 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CRNNQ9UBG3 495 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRPC4Q9UBN4 977 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 HESX1Q9UBX0 185 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 NKX1-2Q9UD57 310 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIM10Q9UDY6 481 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FBXL17Q9UF56 701 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARMCX3Q9UH62 379 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 STEAP1Q9UHE8 339 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC23A1Q9UHI7 598 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 DDX25Q9UHL0 483 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM153AQ9UHL3 310 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 VPS51Q9UID3 782 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TEKT2Q9UIF3 430 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 MAGEL2Q9UJ55 1249 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 HAO1Q9UJM8 370 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PTBP2Q9UKA9 531 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CPSF3Q9UKF6 684 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 APPL1Q9UKG1 709 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RCOR1Q9UKL0 485 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TSPAN16Q9UKR8 245 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FBXW2Q9UKT8 454 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 AMFRQ9UKV5 643 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 INTS6Q9UL03 887 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CFAP45Q9UL16 551 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCPG1Q9ULG6 757 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 GRID1Q9ULK0 1009 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 NENFQ9UMX5 172 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADAMTS5Q9UNA0 930 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 STX8Q9UNK0 236 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC12A4Q9UP95 1085 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 AGAP1Q9UPQ3 857 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 EXOC7Q9UPT5 735 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 EXO1Q9UQ84 846 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CDYLQ9Y232 598 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RUVBL1Q9Y265 456 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 DRG1Q9Y295 367 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TDRKHQ9Y2W6 561 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 UBE2J1Q9Y385 318 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PAM16Q9Y3D7 125 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PTRH2Q9Y3E5 179 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 STRAPQ9Y3F4 350 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADAM18Q9Y3Q7 739 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 C2CD2Q9Y426 696 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 JRKLQ9Y4A0 524 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PCDHGA5Q9Y5G8 931 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PCDHGA1Q9Y5H4 931 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PCDHA10Q9Y5I2 948 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 LIPGQ9Y5X9 500 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 COPG1Q9Y678 874 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 NFS1Q9Y697 457 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CDY1Q9Y6F8 540 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CLCA3PQ9Y6N3 262 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ACEP12821 1306 aa0.59□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIF7Q2M1P5 1343 aa0.59□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM205AQ6ZU69 1335 aa0.59□□□□□ -2.32
RNU4-54P-201ENST00000516428 NPHP3Q7Z494 1330 aa0.59□□□□□ -2.32
RNU4-54P-201ENST00000516428 TTC21BQ7Z4L5 1316 aa0.59□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADGRF5Q8IZF2 1346 aa0.59□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF541Q9H0D2 1346 aa0.59□□□□□ -2.32
RNU4-54P-201ENST00000516428 NSD2O96028 1365 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 AATKQ6ZMQ8 1374 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 DHX29Q7Z478 1369 aaKnown RBP0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZMYM2Q9UBW7 1377 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 NPC1L1Q9UHC9 1359 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 TNIKQ9UKE5 1360 aa0.58□□□□□ -2.32
RNU4-54P-201ENST00000516428 UNC13AQ9UPW8 1703 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms