RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 ABCF3Q9NUQ8 709 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 GNPTGQ9UJJ9 305 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 PPM1HQ9ULR3 514 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 DNAJC16Q9Y2G8 782 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 ZNF106Q9H2Y7 1883 aaKnown RBP19.96■□□□□ 0.79
TRIO-223ENST00000515710 PDE4DIPQ5VU43 2346 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 CCDC189A1A4V9 331 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 ARNTLO00327 626 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 GPR39O43194 453 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 NIPSNAP2O75323 286 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 HLA-EP13747 358 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 ELAVL3Q14576 367 aaKnown RBP19.96■□□□□ 0.79
TRIO-223ENST00000515710 SETDB1Q15047 1291 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 LRRC73Q5JTD7 316 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 PTRHD1Q6GMV3 140 aaKnown RBP19.96■□□□□ 0.79
TRIO-223ENST00000515710 SORT1Q99523 831 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 RPP25Q9BUL9 199 aaKnown RBP19.96■□□□□ 0.79
TRIO-223ENST00000515710 TMEM120AQ9BXJ8 343 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 CDH19Q9H159 772 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 ZDHHC3Q9NYG2 299 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 SCN8AQ9UQD0 1980 aa19.96■□□□□ 0.79
TRIO-223ENST00000515710 KIAA1549LQ6ZVL6 1849 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 DOCK8Q8NF50 2099 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 COL4A3Q01955 1670 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 KPNA3O00505 521 aaPredicted RBP19.95■□□□□ 0.78
TRIO-223ENST00000515710 ZBTB14O43829 449 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 SNUPNO95149 360 aaKnown RBP19.95■□□□□ 0.78
TRIO-223ENST00000515710 HSPA4LO95757 839 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 SERPINB5P36952 375 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 DCDC1P59894 354 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 NAIF1Q69YI7 327 aaPredicted RBP19.95■□□□□ 0.78
TRIO-223ENST00000515710 RAVER1Q8IY67 606 aaKnown RBP19.95■□□□□ 0.78
TRIO-223ENST00000515710 SMRP1Q8NCR6 262 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 PIP4K2CQ8TBX8 421 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 CHFRQ96EP1 664 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 SGF29Q96ES7 293 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 FAM129BQ96TA1 746 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 ALG9Q9H6U8 611 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 NFKBIL1Q9UBC1 381 aaPredicted RBP19.95■□□□□ 0.78
TRIO-223ENST00000515710 DHRS7Q9Y394 339 aa19.95■□□□□ 0.78
TRIO-223ENST00000515710 TRANK1O15050 2925 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 NPHS1O60500 1241 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 ITGB7P26010 798 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 CA5AP35218 305 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 NAGLUP54802 743 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 RCN2Q14257 317 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 LRIT3Q3SXY7 679 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 PARS2Q7L3T8 475 aaKnown RBP19.94■□□□□ 0.78
TRIO-223ENST00000515710 DSG4Q86SJ6 1040 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 SFTPA1Q8IWL2 248 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 CD200R1Q8TD46 325 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 KIAA1191Q96A73 305 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 PPP1R16AQ96I34 528 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 MYCBPQ99417 103 aaPredicted RBP19.94■□□□□ 0.78
TRIO-223ENST00000515710 GALPQ9UBC7 116 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 SARDHQ9UL12 918 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 MTF2Q9Y483 593 aaPredicted RBP19.94■□□□□ 0.78
TRIO-223ENST00000515710 MUC22E2RYF6 1773 aaPredicted RBP19.94■□□□□ 0.78
TRIO-223ENST00000515710 IPO13O94829 963 aaKnown RBP19.94■□□□□ 0.78
TRIO-223ENST00000515710 TPBGLP0DKB5 382 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 KITP10721 976 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 ARRB2P32121 409 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 NSG1P42857 185 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 IL2P60568 153 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 RALGDSQ12967 914 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 MACC1Q6ZN28 852 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 PIWIL4Q7Z3Z4 852 aaKnown RBP19.94■□□□□ 0.78
TRIO-223ENST00000515710 PACS2Q86VP3 889 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 FITM2Q8N6M3 262 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 SIDT2Q8NBJ9 832 aaKnown RBP19.94■□□□□ 0.78
TRIO-223ENST00000515710 TXNDC5Q8NBS9 432 aaKnown RBP19.94■□□□□ 0.78
TRIO-223ENST00000515710 STAG3L4Q8TBR4 150 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 PTERQ96BW5 349 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 FAM136AQ96C01 138 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 LRRC37BQ96QE4 947 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 FAM83DQ9H4H8 585 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 STN1Q9H668 368 aaKnown RBP19.94■□□□□ 0.78
TRIO-223ENST00000515710 NCKIPSDQ9NZQ3 722 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 NUMBLQ9Y6R0 609 aa19.94■□□□□ 0.78
TRIO-223ENST00000515710 DENND4AQ7Z401 1863 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 ANHXE9PGG2 379 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 PSMD11O00231 422 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 SMIM24O75264 130 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 HNRNPLP14866 589 aaKnown RBP eCLIP19.93■□□□□ 0.78
TRIO-223ENST00000515710 MMP12P39900 470 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 IL12RB1P42701 662 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 CLCN7P51798 805 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 GRIN2CQ14957 1233 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 ATP13A5Q4VNC0 1218 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 ATG14Q6ZNE5 492 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 RFLNAQ6ZTI6 216 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 HSD11B1LQ7Z5J1 315 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 SPNS2Q8IVW8 549 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 CSGALNACT1Q8TDX6 532 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 INPP5DQ92835 1189 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 PDLIM5Q96HC4 596 aaKnown RBP19.93■□□□□ 0.78
TRIO-223ENST00000515710 CNDP1Q96KN2 507 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 COPS8Q99627 209 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 BOCQ9BWV1 1114 aa19.93■□□□□ 0.78
TRIO-223ENST00000515710 ILKAPQ9H0C8 392 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms