RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 WDFY3Q8IZQ1 3526 aa12.66□□□□□ -0.38
CLCN3-210ENST00000515420 UNC13CQ8NB66 2214 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 KMT2BQ9UMN6 2715 aaPredicted RBP12.65□□□□□ -0.38
CLCN3-210ENST00000515420 CACNA1BQ00975 2339 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 C2orf81A6NN90 581 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ERI2A8K979 691 aaKnown RBP12.65□□□□□ -0.38
CLCN3-210ENST00000515420 B4DGG1 531 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 CHUKO15111 745 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ZW10O43264 779 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 LIASO43766 372 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 VEGFDO43915 354 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 AGTP01019 485 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 LPOP22079 712 aaPredicted RBP12.65□□□□□ -0.38
CLCN3-210ENST00000515420 AK4P27144 223 aaPredicted RBP12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ACTR1BP42025 376 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 CLDN6P56747 220 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ACTR1AP61163 376 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ITGA9Q13797 1035 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 SPIDRQ14159 915 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 NR1D2Q14995 579 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 TCEA2Q15560 299 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ISXQ2M1V0 245 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ALS2CLQ60I27 953 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 DRICH1Q6PGQ1 229 aaPredicted RBP12.65□□□□□ -0.38
CLCN3-210ENST00000515420 SLC30A9Q6PML9 568 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ZNF438Q7Z4V0 828 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 BRSK1Q8TDC3 778 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 TLR10Q9BXR5 811 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 IL26Q9NPH9 171 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 SMOXQ9NWM0 555 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ATXN10Q9UBB4 475 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ZNHIT2Q9UHR6 403 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ZMIZ1Q9ULJ6 1067 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 ST14Q9Y5Y6 855 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 BPTFQ12830 3046 aa12.65□□□□□ -0.38
CLCN3-210ENST00000515420 APC2O95996 2303 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 GLYATL1P3A0A0U1RQE8 302 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 STX7O15400 261 aaKnown RBP12.64□□□□□ -0.39
CLCN3-210ENST00000515420 GRID2O43424 1007 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 CSO75390 466 aaKnown RBP12.64□□□□□ -0.39
CLCN3-210ENST00000515420 CRTAMO95727 393 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 SLC2A4P14672 509 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 ACTN2P35609 894 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 GPR3P46089 330 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 GDF10P55107 478 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 MSLNQ13421 630 aaPredicted RBP12.64□□□□□ -0.39
CLCN3-210ENST00000515420 CCNG2Q16589 344 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 CLPPQ16740 277 aaPredicted RBP12.64□□□□□ -0.39
CLCN3-210ENST00000515420 ATP13A5Q4VNC0 1218 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 LDLRAP1Q5SW96 308 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 DENND5AQ6IQ26 1287 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 MARK2Q7KZI7 788 aaKnown RBP12.64□□□□□ -0.39
CLCN3-210ENST00000515420 SPRED1Q7Z699 444 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 ADGRG6Q86SQ4 1221 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 LINC00523Q86TU6 105 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 MARCH9Q86YJ5 346 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 NAGSQ8N159 534 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 AVL9Q8NBF6 648 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 DDHD1Q8NEL9 900 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 ATG4AQ8WYN0 398 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 ANP32BQ92688 251 aaKnown RBP12.64□□□□□ -0.39
CLCN3-210ENST00000515420 GFM1Q96RP9 751 aaKnown RBP12.64□□□□□ -0.39
CLCN3-210ENST00000515420 ZCCHC2Q9C0B9 1178 aaKnown RBP12.64□□□□□ -0.39
CLCN3-210ENST00000515420 OR2AG1Q9H205 316 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 SUDS3Q9H7L9 328 aaPredicted RBP12.64□□□□□ -0.39
CLCN3-210ENST00000515420 BPIFA1Q9NP55 256 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 LRIT1Q9P2V4 623 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 RABGEF1Q9UJ41 708 aa12.64□□□□□ -0.39
CLCN3-210ENST00000515420 D6RAR5 112 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 TMX2-CTNND1H3BSU7 103 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 GAPDHSO14556 408 aaPredicted RBP12.63□□□□□ -0.39
CLCN3-210ENST00000515420 KMOO15229 486 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 DXOO77932 396 aaKnown RBP12.63□□□□□ -0.39
CLCN3-210ENST00000515420 AP2A1O95782 977 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 ZNF8P17098 575 aaPredicted RBP12.63□□□□□ -0.39
CLCN3-210ENST00000515420 FDFT1P37268 417 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 HADHAP40939 763 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 FASLGP48023 281 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 SIX1Q15475 284 aaPredicted RBP12.63□□□□□ -0.39
CLCN3-210ENST00000515420 IGF2-ASQ6U949 168 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 CHST15Q7LFX5 561 aaPredicted RBP12.63□□□□□ -0.39
CLCN3-210ENST00000515420 LRRTM4Q86VH4 590 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 CCNJLQ8IV13 435 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 LSMEM2Q8N112 164 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 SFRP1Q8N474 314 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 ARL14Q8N4G2 192 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 MDM1Q8TC05 714 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 TIMM29Q9BSF4 260 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 LRRN3Q9H3W5 708 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 HOMER3Q9NSC5 361 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 DRG1Q9Y295 367 aaKnown RBP12.63□□□□□ -0.39
CLCN3-210ENST00000515420 JRKLQ9Y4A0 524 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 ARL5AQ9Y689 179 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 RNF215Q9Y6U7 377 aa12.63□□□□□ -0.39
CLCN3-210ENST00000515420 ANKRD11Q6UB99 2663 aaPredicted RBP12.62□□□□□ -0.39
CLCN3-210ENST00000515420 A0A1W2PQM1 296 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 A6NCN8 305 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 OR5K4A6NMS3 321 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 RHPN2P1A8MT19 583 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms