RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CALR3Q96L12 384 aaKnown RBP11.39□□□□□ -0.59
VCAN-212ENST00000515397 GFM1Q96RP9 751 aaKnown RBP11.39□□□□□ -0.59
VCAN-212ENST00000515397 NRSN2Q9GZP1 204 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 GBA3Q9H227 469 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 LRRN3Q9H3W5 708 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 RDH14Q9HBH5 336 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 IL26Q9NPH9 171 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 SLC23A2Q9UGH3 650 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 TRHDEQ9UKU6 1024 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 SATB2Q9UPW6 733 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 EFR3BQ9Y2G0 817 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 ENTPD2Q9Y5L3 495 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 RGSL1A5PLK6 1076 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 RHPN2P1A8MT19 583 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 NTN3O00634 580 aaPredicted RBP11.38□□□□□ -0.59
VCAN-212ENST00000515397 PPM1DO15297 605 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 GLB1P16278 677 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 MPSTP25325 297 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 EIF2S3P41091 472 aaKnown RBP11.38□□□□□ -0.59
VCAN-212ENST00000515397 GDF10P55107 478 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 MPP3Q13368 585 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 CHRNA6Q15825 494 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 SLC14A2Q15849 920 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 ATP13A5Q4VNC0 1218 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 ZNF569Q5MCW4 686 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 CERCAMQ5T4B2 595 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 FAM151BQ6UXP7 276 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 ADGRG6Q86SQ4 1221 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 LRRC8AQ8IWT6 810 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 C1orf54Q8WWF1 131 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 VAT1Q99536 393 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 TMEM121Q9BTD3 319 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 FSD1LQ9BXM9 530 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 EPB41L5Q9HCM4 733 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 PIH1D1Q9NWS0 290 aaKnown RBP11.38□□□□□ -0.59
VCAN-212ENST00000515397 TBC1D29Q9UFV1 150 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 ARL5AQ9Y689 179 aa11.38□□□□□ -0.59
VCAN-212ENST00000515397 GOLGA6L9A6NEM1 432 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 MIF4GDA9UHW6 222 aaKnown RBP11.37□□□□□ -0.59
VCAN-212ENST00000515397 CCL22O00626 93 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 ARHGAP6O43182 974 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 GRID2O43424 1007 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 NUAK1O60285 661 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 METTL18O95568 372 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 EPOP01588 193 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 PYGLP06737 847 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 TPH1P17752 444 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 ADRA1AP35348 466 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 TNNT3P45378 269 aaPredicted RBP11.37□□□□□ -0.59
VCAN-212ENST00000515397 GEMP55040 296 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 TMPRSS15P98073 1019 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 B4GALNT1Q00973 533 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 CCDC173Q0VFZ6 552 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 KLF1Q13351 362 aaPredicted RBP11.37□□□□□ -0.59
VCAN-212ENST00000515397 BIRC2Q13490 618 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 SNX1Q13596 522 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 COL28A1Q2UY09 1125 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 ITPRIPL1Q6GPH6 555 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 GLT6D1Q7Z4J2 308 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 SPRED1Q7Z699 444 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 CACTIN-AS1Q8N1I8 211 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 TXLNBQ8N3L3 684 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 RNF10Q8N5U6 811 aaKnown RBP11.37□□□□□ -0.59
VCAN-212ENST00000515397 TRAM1L1Q8N609 369 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 GDAP1Q8TB36 358 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 GLYATL1Q969I3 302 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 SPATA13Q96N96 652 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 CDH19Q9H159 772 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 SEMA6CQ9H3T2 930 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 TRIM39Q9HCM9 518 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 PRDM8Q9NQV8 689 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 KLC4Q9NSK0 619 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 WDR70Q9NW82 654 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 IL17CQ9P0M4 197 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 APPL1Q9UKG1 709 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 DNAJC16Q9Y2G8 782 aa11.37□□□□□ -0.59
VCAN-212ENST00000515397 PRAMEF33A0A0G2JMD5 474 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 KRT86O43790 486 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 ANXA9O76027 345 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 STK10O94804 968 aaKnown RBP11.36□□□□□ -0.59
VCAN-212ENST00000515397 CDK14O94921 469 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 HOXB3P14651 431 aaPredicted RBP11.36□□□□□ -0.59
VCAN-212ENST00000515397 ETS1P14921 441 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 HLA-DPA1P20036 260 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 PPM1FP49593 454 aaPredicted RBP11.36□□□□□ -0.59
VCAN-212ENST00000515397 CCZ1BP86790 482 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 CCZ1P86791 482 aaPredicted RBP11.36□□□□□ -0.59
VCAN-212ENST00000515397 NFATC2Q13469 925 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 PRPSAP1Q14558 356 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 SEPT7Q16181 437 aaKnown RBP11.36□□□□□ -0.59
VCAN-212ENST00000515397 DENND5AQ6IQ26 1287 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 RANBP10Q6VN20 620 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 C17orf82Q86X59 251 aaPredicted RBP11.36□□□□□ -0.59
VCAN-212ENST00000515397 OR4K2Q8NGD2 314 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 SLC37A2Q8TED4 501 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 CCDC97Q96F63 343 aaPredicted RBP11.36□□□□□ -0.59
VCAN-212ENST00000515397 PRR11Q96HE9 360 aaPredicted RBP11.36□□□□□ -0.59
VCAN-212ENST00000515397 NUDT22Q9BRQ3 303 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 ZSCAN5AQ9BUG6 496 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 OSGEPL1Q9H4B0 414 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms