RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SLC17A7Q9P2U7 560 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 USP3Q9Y6I4 520 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 PATJQ8NI35 1801 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 CCL15-CCL14A0A0B4J2E2 113 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 BCLAF3A2AJT9 711 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 DBX1A6NMT0 343 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 A8MXQ7 604 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF487B1APH4 448 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 I3L4J1 428 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 PSMD12O00232 456 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 TRAFD1O14545 582 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 GYG2O15488 501 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 KCNN4O15554 427 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 NBNO60934 754 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 RECQL4O94761 1208 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SRCP12931 536 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 RAG1P15918 1043 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 KELP23276 732 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 LMO2P25791 158 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SERPINB1P30740 379 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 TRHRP34981 398 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 GP5P40197 560 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ETV4P43268 484 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 MAGEA3P43357 314 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 BMXP51813 675 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 CAP1Q01518 475 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SOX4Q06945 474 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 TARDBPQ13148 414 aaKnown RBP eCLIP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 TFDP2Q14188 446 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 FRG1Q14331 258 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 DPYSL2Q16555 572 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 CCL15Q16663 113 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 EFHC1Q5JVL4 640 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 PYHIN1Q6K0P9 492 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 PRPF39Q86UA1 669 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC15A4Q8N697 577 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 TRUB1Q8WWH5 349 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SERAC1Q96JX3 654 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF560Q96MR9 790 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF670Q9BS34 389 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SYT17Q9BSW7 474 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 CHID1Q9BWS9 393 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM49AQ9H0Q0 323 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ABHD16BQ9H3Z7 469 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 POPDC2Q9HBU9 364 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 PNPLA8Q9NP80 782 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 NGRNQ9NPE2 291 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 PCDH10Q9P2E7 1040 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 CHKBQ9Y259 395 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 PCDHB3Q9Y5E6 796 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 MYOCOSA0A1B0GUC4 107 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 A0A1W2PRG6 482 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM25AB3EWG3 89 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM25CB3EWG5 89 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM25GB3EWG6 89 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SYN3O14994 580 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 PSIP1O75475 530 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ALDH1A2O94788 518 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ZWINTO95229 277 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 DHRS4L1P0CG22 281 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SMIM10L2AP0DMW4 78 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SMIM10L2BP0DMW5 78 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 AMPD1P23109 780 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 AKAP5P24588 427 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ARNTP27540 789 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SDC4P31431 198 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 SERPINH1P50454 418 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 YARSP54577 528 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 LTB4RQ15722 352 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 XKR4Q5GH76 650 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 UBXN11Q5T124 520 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 CCNJQ5T5M9 372 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 OTUD1Q5VV17 481 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 PDPK2PQ6A1A2 396 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 OTOAQ7RTW8 1153 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 BNIPLQ7Z465 357 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ZBTB46Q86UZ6 589 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 UNC93AQ86WB7 457 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 FIBCD1Q8N539 461 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ANKFN1Q8N957 763 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 TCP10LQ8TDR4 215 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 C11orf24Q96F05 449 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 VPS39Q96JC1 886 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 NPHS2Q9NP85 383 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 KANSL3Q9P2N6 904 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ANKRD6Q9Y2G4 727 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 MTF2Q9Y483 593 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 MYO18AQ92614 2054 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 PTPRDP23468 1912 aa7.44□□□□□ -1.22
PDLIM5-219ENST00000514743 ARHGAP42A6NI28 874 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 PCDH17O14917 1159 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CIB2O75838 187 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 SNAPINO95295 136 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 PROS1P07225 676 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 T-ENOLP0DO92 83 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 DARSP14868 501 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CASP9P55211 416 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 CDK16Q00536 496 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 GNA12Q03113 381 aa7.43□□□□□ -1.22
PDLIM5-219ENST00000514743 NAB1Q13506 487 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms