RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 TAC1P20366 129 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 P2RY2P41231 377 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 CRY1Q16526 586 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 RBM20Q5T481 1227 aaKnown RBP15.88■□□□□ 0.13
NUP54-214ENST00000514307 C16orf46Q6P387 395 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 TXNDC11Q6PKC3 985 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.88■□□□□ 0.13
NUP54-214ENST00000514307 CDHR3Q6ZTQ4 885 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 HDDC3Q8N4P3 179 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 IL17RCQ8NAC3 791 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 GANCQ8TET4 914 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 KCNJ9Q92806 393 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 UBXN10Q96LJ8 280 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 PITPNM3Q9BZ71 974 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 P2RY12Q9H244 342 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 KLHL42Q9P2K6 505 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 TRMT6Q9UJA5 497 aaKnown RBP15.88■□□□□ 0.13
NUP54-214ENST00000514307 MRPS17Q9Y2R5 130 aaKnown RBP15.88■□□□□ 0.13
NUP54-214ENST00000514307 MYOFQ9NZM1 2061 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 LOC730098B7Z3J9 87 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 QSOX1O00391 747 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 GAPDHSO14556 408 aaPredicted RBP15.87■□□□□ 0.13
NUP54-214ENST00000514307 NDUFAB1O14561 156 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 KLF11O14901 512 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 KPNA5O15131 536 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 H2AFYO75367 372 aaKnown RBP15.87■□□□□ 0.13
NUP54-214ENST00000514307 F7P08709 466 aaPredicted RBP15.87■□□□□ 0.13
NUP54-214ENST00000514307 OR56A5P0C7T3 313 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 PRSS56P0CW18 603 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 HOXB2P14652 356 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 GRK2P25098 689 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 ALDH3A1P30838 453 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 SEC24CP53992 1094 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 CDKN2DP55273 166 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 IL2P60568 153 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 ATP6V0D1P61421 351 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 RPS14P62263 151 aaKnown RBP15.87■□□□□ 0.13
NUP54-214ENST00000514307 CREB5Q02930 508 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 PRKCQQ04759 706 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 CNTN1Q12860 1018 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 RALGDSQ12967 914 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 LRRC73Q5JTD7 316 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 LDLRAP1Q5SW96 308 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 ZNF852Q6ZMS4 543 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 MACC1Q6ZN28 852 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 SYNPOQ8N3V7 929 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 TXNDC5Q8NBS9 432 aaKnown RBP15.87■□□□□ 0.13
NUP54-214ENST00000514307 KCTD4Q8WVF5 259 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 INPP5DQ92835 1189 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 NXNL1Q96CM4 212 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 AP2M1Q96CW1 435 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 CCDC126Q96EE4 140 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 SHDQ96IW2 340 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 COQ10AQ96MF6 247 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 BIRC8Q96P09 236 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 ZNF317Q96PQ6 595 aaPredicted RBP15.87■□□□□ 0.13
NUP54-214ENST00000514307 NELL2Q99435 816 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 OLFM1Q99784 485 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 RIOK2Q9BVS4 552 aaKnown RBP15.87■□□□□ 0.13
NUP54-214ENST00000514307 ABCG8Q9H221 673 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 SMOXQ9NWM0 555 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 FADS3Q9Y5Q0 445 aa15.87■□□□□ 0.13
NUP54-214ENST00000514307 AP2A2O94973 939 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 MYL2P10916 166 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 ETV3P41162 512 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 STX3Q13277 289 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 ATP13A5Q4VNC0 1218 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 SETMARQ53H47 684 aaPredicted RBP15.86■□□□□ 0.13
NUP54-214ENST00000514307 TMPRSS6Q8IU80 811 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 LRRC34Q8IZ02 419 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 PLD6Q8N2A8 252 aaKnown RBP15.86■□□□□ 0.13
NUP54-214ENST00000514307 BTN2A2Q8WVV5 523 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 EZH1Q92800 747 aaPredicted RBP15.86■□□□□ 0.13
NUP54-214ENST00000514307 VPS35Q96QK1 796 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 PANX3Q96QZ0 392 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 WRAP53Q9BUR4 548 aaKnown RBP15.86■□□□□ 0.13
NUP54-214ENST00000514307 C1QTNF1Q9BXJ1 281 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 MRPL46Q9H2W6 279 aaKnown RBP15.86■□□□□ 0.13
NUP54-214ENST00000514307 C12orf65Q9H3J6 166 aaKnown RBP15.86■□□□□ 0.13
NUP54-214ENST00000514307 SIRPGQ9P1W8 387 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 DHRS7Q9Y394 339 aa15.86■□□□□ 0.13
NUP54-214ENST00000514307 OAS3Q9Y6K5 1087 aaKnown RBP15.86■□□□□ 0.13
NUP54-214ENST00000514307 MID1O15344 667 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 OR1I1O60431 355 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 MAGEC1O60732 1142 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 MMP20O60882 483 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 ATG13O75143 517 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 RECQL5O94762 991 aaPredicted RBP15.85■□□□□ 0.13
NUP54-214ENST00000514307 PCDH8O95206 1070 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 ACADMP11310 421 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 MSH3P20585 1137 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 RGS4P49798 205 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 IRX4P78413 519 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 IRF9Q00978 393 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 DPTQ07507 201 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 CSHL1Q14406 222 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 TTLL9Q3SXZ7 439 aa15.85■□□□□ 0.13
NUP54-214ENST00000514307 TTC31Q49AM3 519 aaPredicted RBP15.85■□□□□ 0.13
NUP54-214ENST00000514307 GKAP1Q5VSY0 366 aaPredicted RBP15.85■□□□□ 0.13
NUP54-214ENST00000514307 FSTL5Q8N475 847 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms