RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ERLEC1Q96DZ1 483 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 RNF31Q96EP0 1072 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 PTCD3Q96EY7 689 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 PCED1BQ96HM7 432 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 PIWIL1Q96J94 861 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 SYT15Q9BQS2 421 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 TM6SF1Q9BZW5 370 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 DCLK3Q9C098 648 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 B3GNT4Q9C0J1 378 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ELOVL4Q9GZR5 314 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 NACA2Q9H009 215 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 TMEM60Q9H2L4 133 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 TMEM245Q9H330 911 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ST6GALNAC4Q9H4F1 302 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 FBXO44Q9H4M3 255 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 UNKLQ9H9P5 680 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 TLR8Q9NR97 1041 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 AASDHPPTQ9NRN7 309 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 C14orf119Q9NWQ9 140 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 SEPT10Q9P0V9 454 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 AGO2Q9UKV8 859 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ITGA11Q9UKX5 1188 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ODF2LQ9ULJ1 636 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 FZD4Q9ULV1 537 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 AGAP1Q9UPQ3 857 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 SATB2Q9UPW6 733 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 LRP12Q9Y561 859 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 SNX9Q9Y5X1 595 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ZFHX3Q15911 3703 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 PTPRJQ12913 1337 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 LRRK1Q38SD2 2015 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 RP1L1Q8IWN7 2480 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 CCDC187A0A096LP49 1063 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 A0A1B0GVM2 712 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 TARSL2A2RTX5 802 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 VPS37CA5D8V6 355 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 LINC01548A6NM66 108 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 LATO43561 262 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 PEX1O43933 1283 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 TLR5O60602 858 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 ATP2C2O75185 946 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 TACC1O75410 805 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 TNFSF15O95150 251 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 ATP5BP06576 529 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 PRR35P0CG20 571 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 LIPCP11150 499 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 WARSP23381 471 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 GCSHP23434 173 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 DGKAP23743 735 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 GNL1P36915 607 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 COG7P83436 770 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 MGAT5Q09328 741 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 LAMB3Q13751 1172 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 KCNJ12Q14500 433 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 DHX8Q14562 1220 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 IGFBP7Q16270 282 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 GEN1Q17RS7 908 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 C3orf38Q5JPI3 329 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 FHL5Q5TD97 284 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 ZNF776Q68DI1 518 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 NAPEPLDQ6IQ20 393 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 RBM44Q6ZP01 1051 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 TADA2BQ86TJ2 420 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 PRPF39Q86UA1 669 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 DIS3L2Q8IYB7 885 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC34A3Q8N130 599 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 CPXM2Q8N436 756 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 C4orf32Q8N8J7 132 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 ZNF557Q8N988 423 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 OR14C36Q8NHC7 312 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 MAPK15Q8TD08 544 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 WFIKKN2Q8TEU8 576 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 COG1Q8WTW3 980 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 KBTBD7Q8WVZ9 684 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 FBXO32Q969P5 355 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 MYLPFQ96A32 169 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 MIB2Q96AX9 1013 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 TMEM159Q96B96 161 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 MOCOSQ96EN8 888 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 SERAC1Q96JX3 654 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 APOLD1Q96LR9 279 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 RSPH9Q9H1X1 276 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 EBF2Q9HAK2 575 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 PRSS16Q9NQE7 514 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 GJB4Q9NTQ9 266 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 FBXL12Q9NXK8 326 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 NLGN3Q9NZ94 848 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 TRHDEQ9UKU6 1024 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 MRFAP1Q9Y605 127 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 CYP46A1Q9Y6A2 500 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 MED13Q9UHV7 2174 aa3.77□□□□□ -1.81
PDLIM5-218ENST00000513341 ATP8B3O60423 1300 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 A0A1W2PNU3 283 aaPredicted RBP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PRSS38A1L453 326 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 EME2A4GXA9 379 aaPredicted RBP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PRAMEF26H0Y7S4 382 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 TPP1O14773 563 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 KIAA0391O15091 583 aaKnown RBP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 SCAMP1O15126 338 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 238.3 ms