RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 ACOX2Q99424 681 aa3.45□□□□□ -1.86
LINC01088-210ENST00000513153 PCGF1Q9BSM1 259 aa3.45□□□□□ -1.86
LINC01088-210ENST00000513153 LRMDAQ9H2I8 198 aa3.45□□□□□ -1.86
LINC01088-210ENST00000513153 VEZTQ9HBM0 779 aa3.45□□□□□ -1.86
LINC01088-210ENST00000513153 SLC52A3Q9NQ40 469 aa3.45□□□□□ -1.86
LINC01088-210ENST00000513153 ASAH2Q9NR71 780 aa3.45□□□□□ -1.86
LINC01088-210ENST00000513153 SLC6A13Q9NSD5 602 aa3.45□□□□□ -1.86
LINC01088-210ENST00000513153 MARCH4Q9P2E8 410 aaPredicted RBP3.45□□□□□ -1.86
LINC01088-210ENST00000513153 HAO1Q9UJM8 370 aa3.45□□□□□ -1.86
LINC01088-210ENST00000513153 SMCHD1A6NHR9 2005 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 A0A1W2PNU3 283 aaPredicted RBP3.44□□□□□ -1.86
LINC01088-210ENST00000513153 A0A1W2PPI3 338 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 PSMD14O00487 310 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 CIDEAO60543 219 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 GNB3P16520 340 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 UGT1A1P22309 533 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 HOXC8P31273 242 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 HOXC9P31274 260 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 ABCD1P33897 745 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 UBA7P41226 1012 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 MLLT10P55197 1068 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 VAMP2P63027 116 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 MAD2L1Q13257 205 aaPredicted RBP3.44□□□□□ -1.86
LINC01088-210ENST00000513153 KIR2DS3Q14952 304 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 BAK1Q16611 211 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 RBMS3Q6XE24 437 aaKnown RBP3.44□□□□□ -1.86
LINC01088-210ENST00000513153 DPPA4Q7L190 304 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 CCDC13Q8IYE1 715 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 WDR20Q8TBZ3 569 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 ABHD8Q96I13 439 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 USP44Q9H0E7 712 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 BICC1Q9H694 974 aaKnown RBP3.44□□□□□ -1.86
LINC01088-210ENST00000513153 PRKRIP1Q9H875 184 aaPredicted RBP3.44□□□□□ -1.86
LINC01088-210ENST00000513153 OGFRQ9NZT2 677 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 TBX20Q9UMR3 447 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 PRAG1Q86YV5 1406 aa3.44□□□□□ -1.86
LINC01088-210ENST00000513153 FAM237AA0A1B0GTK4 181 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 OR5K3A6NET4 321 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 FAM90A26D6RGX4 464 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 SNAP23O00161 211 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 ANKRD28O15084 1053 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 CD48P09326 243 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 HNRNPA1P09651 372 aaKnown RBP eCLIP3.43□□□□□ -1.86
LINC01088-210ENST00000513153 ZNF26P17031 533 aaPredicted RBP3.43□□□□□ -1.86
LINC01088-210ENST00000513153 ARL1P40616 181 aaPredicted RBP3.43□□□□□ -1.86
LINC01088-210ENST00000513153 PAFAH1B1P43034 410 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 IRX1P78414 480 aaPredicted RBP3.43□□□□□ -1.86
LINC01088-210ENST00000513153 NEXNQ0ZGT2 675 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 GALNT2Q10471 571 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 ACVR2BQ13705 512 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 LPAL2Q16609 132 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 ALG11Q2TAA5 492 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 PRICKLE4Q2TBC4 344 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 PIWIL4Q7Z3Z4 852 aaKnown RBP3.43□□□□□ -1.86
LINC01088-210ENST00000513153 RDM1Q8NG50 284 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 SLC44A1Q8WWI5 657 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 IGSF8Q969P0 613 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 PHF21AQ96BD5 680 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 HVCN1Q96D96 273 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 KIF9Q9HAQ2 790 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.43□□□□□ -1.86
LINC01088-210ENST00000513153 RNF215Q9Y6U7 377 aa3.43□□□□□ -1.86
LINC01088-210ENST00000513153 M0QZ24 198 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 PDE9AO76083 593 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 ZNF182P17025 639 aaPredicted RBP3.42□□□□□ -1.86
LINC01088-210ENST00000513153 UBA1P22314 1058 aaKnown RBP3.42□□□□□ -1.86
LINC01088-210ENST00000513153 CNTFP26441 200 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 NR2C2P49116 596 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 PTP4A2Q12974 167 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 TRPC3Q13507 836 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 OLIG2Q13516 323 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 ZC2HC1CQ53FD0 456 aaPredicted RBP3.42□□□□□ -1.86
LINC01088-210ENST00000513153 KRTCAP3Q53RY4 240 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 PAPD4Q6PIY7 484 aaKnown RBP3.42□□□□□ -1.86
LINC01088-210ENST00000513153 CYP26C1Q6V0L0 522 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 ANO5Q75V66 913 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 GCC1Q96CN9 775 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 SAAL1Q96ER3 474 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 UBXN10Q96LJ8 280 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 TMEM68Q96MH6 324 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 PYGO2Q9BRQ0 406 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 ZBTB20Q9HC78 741 aaPredicted RBP3.42□□□□□ -1.86
LINC01088-210ENST00000513153 ADPRHL2Q9NX46 363 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 ACAD8Q9UKU7 415 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 INTS6Q9UL03 887 aaKnown RBP3.42□□□□□ -1.86
LINC01088-210ENST00000513153 SARDHQ9UL12 918 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 JRKLQ9Y4A0 524 aa3.42□□□□□ -1.86
LINC01088-210ENST00000513153 A0A1W2PP11 408 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 C5orf60A6NFR6 353 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 DUXAA6NLW8 204 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 KRTAP16-1A8MUX0 517 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 ANKRD66B4E2M5 251 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 CRLF1O75462 422 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 MSH3P20585 1137 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 PIP4K2AP48426 406 aaPredicted RBP3.41□□□□□ -1.86
LINC01088-210ENST00000513153 CTCFP49711 727 aaPredicted RBP3.41□□□□□ -1.86
LINC01088-210ENST00000513153 TBX2Q13207 712 aaPredicted RBP3.41□□□□□ -1.86
LINC01088-210ENST00000513153 DCTN2Q13561 401 aaKnown RBP3.41□□□□□ -1.86
LINC01088-210ENST00000513153 ITGA9Q13797 1035 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 FAM69AQ5T7M9 428 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms