RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 FOXJ1Q92949 421 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 GLYATL1Q969I3 302 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 TTC1Q99614 292 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 ORAI3Q9BRQ5 295 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 FZD3Q9NPG1 666 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 INTS10Q9NVR2 710 aaKnown RBP12.43□□□□□ -0.42
PDPN-210ENST00000513143 ZSCAN32Q9NX65 697 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 SLC17A6Q9P2U8 582 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 CRLS1Q9UJA2 301 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 PLAAQ9Y263 795 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 NFS1Q9Y697 457 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 FANCMQ8IYD8 2048 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 TNRC6BQ9UPQ9 1833 aaKnown RBP12.42□□□□□ -0.42
PDPN-210ENST00000513143 IGLV3-16A0A075B6K0 115 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 EXOC1LA0A1B0GW35 172 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 PRAMEF26H0Y7S4 382 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 HRO43593 1189 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 TCEA3O75764 348 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 SLC34A2O95436 690 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 ACRV1P26436 265 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 CD27P26842 260 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 GCAP28676 217 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 PMLP29590 882 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 CNR2P34972 360 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 LEPRP48357 1165 aaKnown RBP12.42□□□□□ -0.42
PDPN-210ENST00000513143 EIF3BP55884 814 aaKnown RBP12.42□□□□□ -0.42
PDPN-210ENST00000513143 INPP5AQ14642 412 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 DBN1Q16643 649 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 GPRC6AQ5T6X5 926 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 HDXQ7Z353 690 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 LDB1Q86U70 411 aaPredicted RBP12.42□□□□□ -0.42
PDPN-210ENST00000513143 DEFB119Q8N690 84 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 PNPLA1Q8N8W4 532 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 ZBTB44Q8NCP5 570 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 DDHD1Q8NEL9 900 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 OR2W6PQ8NHA6 318 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 SLC44A1Q8WWI5 657 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 COX14Q96I36 57 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 BMFQ96LC9 184 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 CPNE1Q99829 537 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 MCMBPQ9BTE3 642 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 DHRS4Q9BTZ2 278 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 TMEM109Q9BVC6 243 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 TEX101Q9BY14 249 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 PPCSQ9HAB8 311 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 ZDHHC3Q9NYG2 299 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 PSAT1Q9Y617 370 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 HS3ST3A1Q9Y663 406 aa12.42□□□□□ -0.42
PDPN-210ENST00000513143 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 POM121BA6NF01 834 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 POC1B-GALNT4F8VUJ3 575 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 TOR1BO14657 336 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 FPGTO14772 594 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 PFDN6O15212 129 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 INPP4BO15327 924 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 HAUS5O94927 633 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 SLC25A14O95258 325 aaPredicted RBP12.41□□□□□ -0.42
PDPN-210ENST00000513143 AHSGP02765 367 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 IVLP07476 585 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 HOXC4P09017 264 aaPredicted RBP12.41□□□□□ -0.42
PDPN-210ENST00000513143 GABRB3P28472 473 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 GP5P40197 560 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 PTGER3P43115 390 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 CSE1LP55060 971 aaKnown RBP12.41□□□□□ -0.42
PDPN-210ENST00000513143 MPP1Q00013 466 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 CDK3Q00526 305 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 SRSF5Q13243 272 aaKnown RBP12.41□□□□□ -0.42
PDPN-210ENST00000513143 ITIH4Q14624 930 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 ZNF789Q5FWF6 425 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 LDLRAP1Q5SW96 308 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 RNF187Q5TA31 235 aaPredicted RBP12.41□□□□□ -0.42
PDPN-210ENST00000513143 GRTP1Q5TC63 336 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 LRIG3Q6UXM1 1119 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 PACS1Q6VY07 963 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 GCNT7Q6ZNI0 430 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 LPCAT2Q7L5N7 544 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 STRA8Q7Z7C7 330 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 ABI3BPQ7Z7G0 1075 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 HEATR4Q86WZ0 1026 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 PHYKPLQ8IUZ5 450 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 TMEFF1Q8IYR6 380 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 HEXDCQ8WVB3 486 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 DCAKDQ8WVC6 231 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 DNASE2BQ8WZ79 361 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 SNX19Q92543 992 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 LPGAT1Q92604 370 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 HIC2Q96JB3 615 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 SERAC1Q96JX3 654 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 HSPA12BQ96MM6 686 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 ZIM3Q96PE6 472 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 PAFAH2Q99487 392 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 COPS8Q99627 209 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 MYOCQ99972 504 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 APOOQ9BUR5 198 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 C1QTNF1Q9BXJ1 281 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 ROPN1BQ9BZX4 212 aaPredicted RBP12.41□□□□□ -0.42
PDPN-210ENST00000513143 WDR26Q9H7D7 661 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 ROPN1Q9HAT0 212 aaPredicted RBP12.41□□□□□ -0.42
PDPN-210ENST00000513143 FBXO6Q9NRD1 293 aaPredicted RBP12.41□□□□□ -0.42
PDPN-210ENST00000513143 TXNDC16Q9P2K2 825 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms