RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 OXNAD1Q96HP4 312 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 AGAP3Q96P47 875 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 RANBP9Q96S59 729 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 KIFC1Q9BW19 673 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 SLC2A11Q9BYW1 496 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 POLR1EQ9GZS1 481 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 FBRSQ9HAH7 460 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 ABCB8Q9NUT2 735 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 SEPT10Q9P0V9 454 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 PLEKHB1Q9UF11 243 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3DA0A087WVF3 549 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3IA0A087WXS9 549 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3EA0A087X179 549 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3KA0A087X1G2 549 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 LOC285095A0A1B0GVY8 99 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 EXOC1LA0A1B0GW35 172 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3FA6NER0 549 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3LB9A6J9 549 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 J3KR12 359 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 SIN3BO75182 1162 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 CPP00450 1065 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 ITGB2P05107 769 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 RHOCP08134 193 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3HP0C7X1 549 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 NR1D1P20393 614 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 PSMA3P25788 255 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 CNTFP26441 200 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 GCAP28676 217 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 HLA-FP30511 346 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 CSNK1DP48730 415 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 LMAN1P49257 510 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 SLC10A7Q0GE19 358 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 LAMB3Q13751 1172 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 CLCA4Q14CN2 919 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 KCTD19Q17RG1 926 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 UBAP2Q5T6F2 1119 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 FAXCQ5TGI0 409 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 MBLAC2Q68D91 279 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3GQ6DHY5 549 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3CQ6IPX1 549 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 DENND5AQ6IQ26 1287 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 UNC5AQ6ZN44 842 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 PRPF39Q86UA1 669 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 IGDCC3Q8IVU1 814 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TBC1D3Q8IZP1 549 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 CFAP52Q8N1V2 620 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 SLC44A1Q8WWI5 657 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 SCG3Q8WXD2 468 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 CENPTQ96BT3 561 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 STAMBPL1Q96FJ0 436 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 FEM1CQ96JP0 617 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 LMLNQ96KR4 655 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 MRGPRX2Q96LB1 330 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 RSPH9Q9H1X1 276 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 VPS37BQ9H9H4 285 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 PSMC3IPQ9P2W1 217 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 UBA2Q9UBT2 640 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 ADAM21Q9UKJ8 722 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 SCML1Q9UN30 329 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 SOX13Q9UN79 622 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 CHMP2BQ9UQN3 213 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 TTLL3Q9Y4R7 772 aa10.47□□□□□ -0.73
PDLIM5-217ENST00000512274 CPED1A4D0V7 1026 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 CASC3O15234 703 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 SHOX2O60902 331 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 RNASEH1O60930 286 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 POLBP06746 335 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 MMP2P08253 660 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 C7P10643 843 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 HLA-DPA1P20036 260 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 POU3F2P20265 443 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 SSTR1P30872 391 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 SLC5A2P31639 672 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 SLC8A1P32418 973 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 ACVRL1P37023 503 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 SERPINB9P50453 376 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 MSLNQ13421 630 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 CST6Q15828 149 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 MARK2Q7KZI7 788 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 NLRP9Q7RTR0 991 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 KIAA0907Q7Z7F0 614 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 CLEC14AQ86T13 490 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 ADIPOR2Q86V24 386 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 SLC26A11Q86WA9 606 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 LRRC6Q86X45 466 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 WDR36Q8NI36 951 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 WFDC5Q8TCV5 224 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 EPS8L3Q8TE67 593 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 FBF1Q8TES7 1133 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 MZB1Q8WU39 189 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 LRRN4Q8WUT4 740 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 ALKBH8Q96BT7 664 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 MTBPQ96DY7 904 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 MYOCQ99972 504 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 TBL1YQ9BQ87 522 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 FEM1AQ9BSK4 669 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 C2orf49Q9BVC5 232 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 GGA2Q9UJY4 613 aa10.46□□□□□ -0.73
PDLIM5-217ENST00000512274 PCDHGA8Q9Y5G5 932 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms