RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 OR2AG2A6NM03 316 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 EPN2O95208 641 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 PRKCGP05129 697 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 PPP2R1BP30154 601 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 CLLU1OSQ5K130 101 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 BEND5Q7L4P6 421 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 ESAMQ96AP7 390 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 PLEKHA8Q96JA3 519 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 TMEM79Q9BSE2 394 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 NOL11Q9H8H0 719 aaKnown RBP13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 CD84Q9UIB8 345 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 KDELR3O43731 214 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 DNTTP04053 509 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 CST5P28325 142 aaPredicted RBP13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 ADSLP30566 484 aaPredicted RBP13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 GNPDA1P46926 289 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 GPM6BQ13491 265 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 GPR33Q49SQ1 333 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 AP1ARQ63HQ0 302 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 C10orf82Q8WW14 230 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 MYOCQ99972 504 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 ACAT2Q9BWD1 397 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 CAPN10Q9HC96 672 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 OXSMQ9NWU1 459 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 ANAPC2Q9UJX6 822 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 BACE2Q9Y5Z0 518 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF840PA6NDX5 716 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 ADAMTS4O75173 837 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 TM7SF2O76062 418 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 CHRNGP07510 517 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 UGT1A6P19224 532 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 UGT1A1P22309 533 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 UGT1A4P22310 534 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 UGT1A3P35503 534 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 UGT1A5P35504 534 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 IDH3AP50213 366 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 IRX1P78414 480 aaPredicted RBP13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 MPP2Q14168 576 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 CARD16Q5EG05 197 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 TCAIMQ8N3R3 496 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 DCAF4L2Q8NA75 395 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 PGAP3Q96FM1 320 aaPredicted RBP13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 WRAP53Q9BUR4 548 aaKnown RBP13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 NUDT4Q9NZJ9 180 aa13.02□□□□□ -0.33
PCDHA4-202ENST00000512229 UBR3Q6ZT12 1888 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 KNL1Q8NG31 2342 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 COL4A1P02462 1669 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3DA0A087WVF3 549 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3IA0A087WXS9 549 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3EA0A087X179 549 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3KA0A087X1G2 549 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3FA6NER0 549 aaPredicted RBP13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3LB9A6J9 549 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TYROBPO43914 113 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 RECQL5O94762 991 aaPredicted RBP13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3HP0C7X1 549 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 ITPKAP23677 461 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 HTR1BP28222 390 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3GQ6DHY5 549 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3CQ6IPX1 549 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TP53INP2Q8IXH6 220 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TBC1D3Q8IZP1 549 aaPredicted RBP13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 SIDT2Q8NBJ9 832 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 ZMIZ2Q8NF64 920 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 IGSF8Q969P0 613 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 ZIC5Q96T25 663 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 EBF4Q9BQW3 602 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TAS2R1Q9NYW7 299 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 KIAA1551Q9HCM1 1747 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 KLF11O14901 512 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 NIPSNAP2O75323 286 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 CLPTM1O96005 669 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 MSX2P35548 267 aaPredicted RBP13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 CSTF3Q12996 717 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 RIPK1Q13546 671 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 MBLAC2Q68D91 279 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 SLC39A5Q6ZMH5 540 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 GK5Q6ZS86 529 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 LYSMD3Q7Z3D4 306 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 SNX20Q7Z614 316 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 NPWQ8N729 165 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 GFM2Q969S9 779 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 PSKH2Q96QS6 385 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 ATG10Q9H0Y0 220 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 SEMA6AQ9H2E6 1030 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 TFB2MQ9H5Q4 396 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 NDUFA13Q9P0J0 144 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 KCTD3Q9Y597 815 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 RFX3P48380 749 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 GCNT7Q6ZNI0 430 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 SPATA19Q7Z5L4 167 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 PHYKPLQ8IUZ5 450 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 BBS7Q8IWZ6 715 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 GPR156Q8NFN8 814 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 DACH2Q96NX9 599 aa13.01□□□□□ -0.33
PCDHA4-202ENST00000512229 BBS4Q96RK4 519 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms