RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CNGA3Q16281 694 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 MAN2A1Q16706 1144 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 VWA3BQ502W6 1294 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 INO80DQ53TQ3 878 aaPredicted RBP9.01□□□□□ -0.97
NUP54-211ENST00000512151 RWDD4Q6NW29 188 aaKnown RBP9.01□□□□□ -0.97
NUP54-211ENST00000512151 IGFL3Q6UXB1 125 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 Q6ZS92 163 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 RFLNAQ6ZTI6 216 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 PPP1R3BQ86XI6 285 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 DNAAF5Q86Y56 855 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 PLXDC1Q8IUK5 500 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 GRHL3Q8TE85 626 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 ANP32BQ92688 251 aaKnown RBP9.01□□□□□ -0.97
NUP54-211ENST00000512151 RELTQ969Z4 430 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 REPIN1Q9BWE0 567 aaKnown RBP9.01□□□□□ -0.97
NUP54-211ENST00000512151 B4GALT6Q9UBX8 382 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 AJAP1Q9UKB5 411 aaPredicted RBP9.01□□□□□ -0.97
NUP54-211ENST00000512151 PRKAB1Q9Y478 270 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.01□□□□□ -0.97
NUP54-211ENST00000512151 CNTRLQ7Z7A1 2325 aa9.01□□□□□ -0.97
NUP54-211ENST00000512151 LILRA5A6NI73 299 aa9□□□□□ -0.97
NUP54-211ENST00000512151 GOLGA6L19H0YKK7 550 aa9□□□□□ -0.97
NUP54-211ENST00000512151 MASP2O00187 686 aa9□□□□□ -0.97
NUP54-211ENST00000512151 PMM2O15305 246 aa9□□□□□ -0.97
NUP54-211ENST00000512151 FAM155BO75949 473 aa9□□□□□ -0.97
NUP54-211ENST00000512151 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
NUP54-211ENST00000512151 FOLR1P15328 257 aa9□□□□□ -0.97
NUP54-211ENST00000512151 CAPN3P20807 821 aa9□□□□□ -0.97
NUP54-211ENST00000512151 FLT3P36888 993 aa9□□□□□ -0.97
NUP54-211ENST00000512151 ETV3P41162 512 aa9□□□□□ -0.97
NUP54-211ENST00000512151 GPS2Q13227 327 aa9□□□□□ -0.97
NUP54-211ENST00000512151 PEX6Q13608 980 aa9□□□□□ -0.97
NUP54-211ENST00000512151 PTPRRQ15256 657 aa9□□□□□ -0.97
NUP54-211ENST00000512151 KYNUQ16719 465 aa9□□□□□ -0.97
NUP54-211ENST00000512151 SLC25A52Q3SY17 297 aa9□□□□□ -0.97
NUP54-211ENST00000512151 CFAP58Q5T655 872 aa9□□□□□ -0.97
NUP54-211ENST00000512151 HGSNATQ68CP4 663 aa9□□□□□ -0.97
NUP54-211ENST00000512151 DPY19L2P1Q6NXN4 242 aa9□□□□□ -0.97
NUP54-211ENST00000512151 CERS6Q6ZMG9 384 aa9□□□□□ -0.97
NUP54-211ENST00000512151 HSD11B1LQ7Z5J1 315 aa9□□□□□ -0.97
NUP54-211ENST00000512151 ZNF354CQ86Y25 554 aa9□□□□□ -0.97
NUP54-211ENST00000512151 ARFGAP1Q8N6T3 406 aa9□□□□□ -0.97
NUP54-211ENST00000512151 SLC38A9Q8NBW4 561 aa9□□□□□ -0.97
NUP54-211ENST00000512151 CASKIN2Q8WXE0 1202 aa9□□□□□ -0.97
NUP54-211ENST00000512151 KLHL6Q8WZ60 621 aa9□□□□□ -0.97
NUP54-211ENST00000512151 ECHDC3Q96DC8 303 aa9□□□□□ -0.97
NUP54-211ENST00000512151 CHST8Q9H2A9 424 aa9□□□□□ -0.97
NUP54-211ENST00000512151 NDST4Q9H3R1 872 aa9□□□□□ -0.97
NUP54-211ENST00000512151 CHST11Q9NPF2 352 aa9□□□□□ -0.97
NUP54-211ENST00000512151 AGPAT4Q9NRZ5 378 aa9□□□□□ -0.97
NUP54-211ENST00000512151 OR12D3Q9UGF7 316 aa9□□□□□ -0.97
NUP54-211ENST00000512151 STAP1Q9ULZ2 295 aa9□□□□□ -0.97
NUP54-211ENST00000512151 G3BP2Q9UN86 482 aaKnown RBP9□□□□□ -0.97
NUP54-211ENST00000512151 NEU2Q9Y3R4 380 aa9□□□□□ -0.97
NUP54-211ENST00000512151 SPTBP11277 2137 aa9□□□□□ -0.97
NUP54-211ENST00000512151 CSPG4Q6UVK1 2322 aa9□□□□□ -0.97
NUP54-211ENST00000512151 RTTNQ86VV8 2226 aa9□□□□□ -0.97
NUP54-211ENST00000512151 JMJD1CQ15652 2540 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 A0A0U1RQS6 177 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 A0A1B0GUH1 482 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 GOLGA6CA6NDK9 693 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 GOLGA6BA6NDN3 693 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 KCNN4O15554 427 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 RASSF9O75901 435 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 LRIG2O94898 1065 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 GOLGA6DP0CG33 693 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 EDN3P14138 238 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 SLC9A1P19634 815 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 KLK7P49862 253 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 VAV2P52735 878 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 ART1P52961 327 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 PPP1CAP62136 330 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 UBE2IP63279 158 aaKnown RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 NRG1Q02297 640 aaPredicted RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 APBA1Q02410 837 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 ZNF235Q14590 738 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 NR1I3Q14994 352 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 ACBD5Q5T8D3 534 aaPredicted RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 LYPLAL1Q5VWZ2 237 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 DENND2CQ68D51 928 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 RAET1GQ6H3X3 334 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 PRSS42Q7Z5A4 293 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 SRLQ86TD4 932 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 SLC9B2Q86UD5 537 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 PARP9Q8IXQ6 854 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 ENDOVQ8N8Q3 282 aaKnown RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 TMEM102Q8N9M5 508 aaPredicted RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 EHBP1Q8NDI1 1231 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 MR1Q95460 341 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 SH3KBP1Q96B97 665 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 DTD2Q96FN9 168 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 PDLIM2Q96JY6 352 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 CFAP57Q96MR6 1250 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 TUBGCP5Q96RT8 1024 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 ZNF552Q9H707 407 aaPredicted RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 PLCB1Q9NQ66 1216 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 RTN4Q9NQC3 1192 aaKnown RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 GOLGA6AQ9NYA3 693 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 IFNKQ9P0W0 207 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 CPNE7Q9UBL6 633 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms