RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ZCCHC18P0CG32 403 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 THRBP10828 461 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ITGB5P18084 799 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 PDHA2P29803 388 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CDC25AP30304 524 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 MC5RP33032 325 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ECI1P42126 302 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 LEPRP48357 1165 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CAPZA1P52907 286 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC16A1P53985 500 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 MLLT6P55198 1093 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SKP1P63208 163 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SP2Q02086 613 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 TGM3Q08188 693 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SMARCB1Q12824 385 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 IL10RAQ13651 578 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 NPY5RQ15761 445 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 GAB4Q2WGN9 574 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 INTS6LQ5JSJ4 861 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 GNASQ5JWF2 1037 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF385CQ66K41 422 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 TAPT1Q6NXT6 567 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 LAYNQ6UX15 382 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 MAMDC4Q6UXC1 1216 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CYFIP1Q7L576 1253 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZC3H18Q86VM9 953 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 FAM131BQ86XD5 332 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SNX31Q8N9S9 440 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SMG7Q92540 1137 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 FAM122AQ96E09 287 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CNTNAP3BQ96NU0 1288 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 NEU1Q99519 415 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 TSC22D3Q99576 134 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ELF4Q99607 663 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CITED1Q99966 193 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CNTNAP3Q9BZ76 1288 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CELF4Q9BZC1 486 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 YIPF3Q9GZM5 350 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 VCX2Q9H322 139 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 C12orf10Q9HB07 376 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 PAK6Q9NQU5 681 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ARHGAP20Q9P2F6 1191 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 DNAJB4Q9UDY4 337 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 TSPAN16Q9UKR8 245 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 HIF3AQ9Y2N7 669 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 STK36Q9NRP7 1315 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 A0A0A0MRY4 1105 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 VWA3AA6NCI4 1184 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 KIF28PB7ZC32 967 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 H3BUI4 141 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SCAMP2O15127 329 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 KLK10O43240 276 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 NOBOXO60393 691 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ATP9AO75110 1047 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLCO2B1O94956 709 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 KLKB1P03952 638 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 MMP1P03956 469 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF286BP0CG31 522 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 OR8G3PP0DMU2 310 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 GNAT1P11488 350 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 IL12RB1P42701 662 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 LIG4P49917 911 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SMSP52788 366 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 EIF3BP55884 814 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ADAM17P78536 824 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 E2F2Q14209 437 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 FGL2Q14314 439 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 TTLL4Q14679 1199 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC39A14Q15043 492 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 HYAL4Q2M3T9 481 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 HSDL1Q3SXM5 330 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ARSJQ5FYB0 599 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 RAB41Q5JT25 222 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 XP32Q5T750 250 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 PTCRAQ6ISU1 281 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 DPY19L2P1Q6NXN4 242 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CXCL17Q6UXB2 119 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF573Q86YE8 665 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZZZ3Q8IYH5 903 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC15A4Q8N697 577 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF461Q8TAF7 563 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF596Q8TC21 504 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 OR1E3Q8WZA6 343 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 MRGPRX3Q96LB0 322 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 FERMT1Q9BQL6 677 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 TUBB6Q9BUF5 446 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 TLR10Q9BXR5 811 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 FRMD8Q9BZ67 464 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 KATNBL1Q9H079 304 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 C12orf65Q9H3J6 166 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 PARVBQ9HBI1 364 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 PRDM9Q9NQV7 894 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZFP57Q9NU63 452 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 ETNK2Q9NVF9 386 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 RHBDL2Q9NX52 303 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 DCDC2Q9UHG0 476 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 FBXW2Q9UKT8 454 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CDC14AQ9UNH5 594 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 AP4E1Q9UPM8 1137 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms