RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 PPP1R2P3Q6NXS1 205 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 LYSMD3Q7Z3D4 306 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 GPR26Q8NDV2 337 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 LPCAT1Q8NF37 534 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 ANKRD20A12PQ8NF67 263 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 OR10G6Q8NH81 332 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 STARD8Q92502 1023 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 FAF2Q96CS3 445 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 TRIB3Q96RU7 358 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 NUP85Q9BW27 656 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 ASPSCR1Q9BZE9 553 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 POLR1EQ9GZS1 481 aaKnown RBP13.22□□□□□ -0.29
DDX41-210ENST00000509576 GPN2Q9H9Y4 310 aaPredicted RBP13.22□□□□□ -0.29
DDX41-210ENST00000509576 RBM22Q9NW64 420 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDX41-210ENST00000509576 ANAPC7Q9UJX3 599 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 CCDC88CQ9P219 2028 aa13.22□□□□□ -0.29
DDX41-210ENST00000509576 KIF1CO43896 1103 aaKnown RBP13.21□□□□□ -0.29
DDX41-210ENST00000509576 NUAK1O60285 661 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 SNX2O60749 519 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 TIAF1O95411 115 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 PIRTP0C851 137 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 MYBL1P10243 752 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 F3P13726 295 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 DESP17661 470 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 SLC19A1P41440 591 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 MAPK9P45984 424 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 CCR10P46092 362 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 RAB15P59190 212 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 PPP1CAP62136 330 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 ITKQ08881 620 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 BIRC2Q13490 618 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 UBAP2LQ14157 1087 aaKnown RBP13.21□□□□□ -0.29
DDX41-210ENST00000509576 PIGHQ14442 188 aaPredicted RBP13.21□□□□□ -0.29
DDX41-210ENST00000509576 NR1I3Q14994 352 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 IQCB1Q15051 598 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 HIST2H2BCQ6DN03 193 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 LURAP1LQ8IV03 231 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 ZNF547Q8IVP9 402 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 C9orf43Q8TAL5 461 aaPredicted RBP13.21□□□□□ -0.29
DDX41-210ENST00000509576 TSGA13Q96PP4 275 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 RUFY1Q96T51 708 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 DPYSL5Q9BPU6 564 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 AKIRIN1Q9H9L7 192 aaPredicted RBP13.21□□□□□ -0.29
DDX41-210ENST00000509576 PCDH9Q9HC56 1237 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 CPNE7Q9UBL6 633 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 TP53TG5Q9Y2B4 290 aa13.21□□□□□ -0.29
DDX41-210ENST00000509576 HIVEP3Q5T1R4 2406 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 C1orf232A0A0U1RR37 186 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 LILRA5A6NI73 299 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 KCNK1O00180 336 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 GRID2O43424 1007 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 MAP4P27816 1152 aaKnown RBP13.2□□□□□ -0.3
DDX41-210ENST00000509576 SERPINB6P35237 376 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 GJC1P36383 396 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 EPHA4P54764 986 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 ABHD18Q0P651 414 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 GALNT3Q14435 633 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 PLA2G4EQ3MJ16 856 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 ANKRD20A8PQ5CZ79 823 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 B4GALNT4Q76KP1 1039 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 C11orf96Q7Z7L8 435 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 ADGRG6Q86SQ4 1221 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 CCDC112Q8NEF3 446 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 RSC1A1Q92681 617 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 FATE1Q969F0 183 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 MIB2Q96AX9 1013 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 AHCYL2Q96HN2 611 aaKnown RBP13.2□□□□□ -0.3
DDX41-210ENST00000509576 TEFMQ96QE5 360 aaKnown RBP13.2□□□□□ -0.3
DDX41-210ENST00000509576 PACSIN1Q9BY11 444 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 CEP41Q9BYV8 373 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 MRPL47Q9HD33 250 aaKnown RBP13.2□□□□□ -0.3
DDX41-210ENST00000509576 RCOR3Q9P2K3 495 aaPredicted RBP13.2□□□□□ -0.3
DDX41-210ENST00000509576 MAN2B2Q9Y2E5 1009 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 KCNMB2Q9Y691 235 aa13.2□□□□□ -0.3
DDX41-210ENST00000509576 ANKRD66B4E2M5 251 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 AURKAO14965 403 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 CHUKO15111 745 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 MTSS1O43312 755 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 MTX2O75431 263 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 ANKRD34CP0C6C1 535 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 TYRP1P17643 537 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 CCNCP24863 283 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 CD86P42081 329 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 ZNF165P49910 485 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 EPHB1P54762 984 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 KRT81Q14533 505 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 ALS2CLQ60I27 953 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 C16orf46Q6P387 395 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 CRTC3Q6UUV7 619 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 CEACAM20Q6UY09 585 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 BBS5Q8N3I7 341 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 PLD5Q8N7P1 536 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 GALNT6Q8NCL4 622 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 RAPGEF5Q92565 580 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 TADA1Q96BN2 335 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 C9orf72Q96LT7 481 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 CATSPER2Q96P56 530 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 PSMG3-AS1Q96PY0 264 aa13.19□□□□□ -0.3
DDX41-210ENST00000509576 BPIFA3Q9BQP9 254 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms