RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CALR3Q96L12 384 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 SPATA16Q9BXB7 569 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 PACSIN1Q9BY11 444 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 TRABDQ9H4I3 376 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 UCK1Q9HA47 277 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 LUC7LQ9NQ29 371 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 CFAP46Q8IYW2 2715 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 A0A0A6YYK5 440 aaPredicted RBP13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 PSTPIP1O43586 416 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 VEGFDO43915 354 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 KCNJ13O60928 360 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 MFAP3LO75121 409 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC25A14O95258 325 aaPredicted RBP13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 KRT1P04264 644 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 MMP2P08253 660 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 F3P13726 295 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 VCLP18206 1134 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 PTPRRQ15256 657 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 TEX44Q53QW1 395 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 RFLNAQ6ZTI6 216 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 TMPRSS9Q7Z410 1059 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 RFX6Q8HWS3 928 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 PLXDC1Q8IUK5 500 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 CNTD1Q8N815 330 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 DTX3LQ8TDB6 740 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 PATE1Q8WXA2 126 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 OLFM3Q96PB7 478 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 AGAP2Q99490 1192 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 VAT1Q99536 393 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 FERMT1Q9BQL6 677 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 GPR63Q9BZJ6 419 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC39A1Q9NY26 324 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 CNOT6Q9ULM6 557 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 ST14Q9Y5Y6 855 aa13.46□□□□□ -0.25
CCHCR1-227ENST00000508852 C3orf70A6NLC5 250 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 J3QKU1 62 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 KMOO15229 486 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 SPOPO43791 374 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 NDST3O95803 873 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 EPOP01588 193 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 ATP1A1P05023 1023 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 FGF3P11487 239 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 ETV5P41161 510 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 ZBTB17Q13105 803 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 IHHQ14623 411 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 KIAA1614Q5VZ46 1190 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 CYB5D1Q6P9G0 228 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 CEACAM20Q6UY09 585 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 TMC3Q7Z5M5 1100 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 TRIM74Q86UV6 250 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 ZFAND4Q86XD8 727 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 RBM12BQ8IXT5 1001 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 IL22RA1Q8N6P7 574 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 RCBTB1Q8NDN9 531 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 BRSK1Q8TDC3 778 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 PTCD2Q8WV60 388 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 TFB1MQ8WVM0 346 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 AGAP3Q96P47 875 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 PLEKHG4BQ96PX9 1271 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 TRIB3Q96RU7 358 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 WDR24Q96S15 920 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 TRIT1Q9H3H1 467 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 TSPY26PQ9H489 355 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 HACD3Q9P035 362 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 FOXJ2Q9P0K8 574 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 PLEKHM1Q9Y4G2 1056 aa13.45□□□□□ -0.26
CCHCR1-227ENST00000508852 ZNF462Q96JM2 2506 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 A0A0U1RQS6 177 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 LILRA5A6NI73 299 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 FADS2P1A8MWK0 482 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 AKR1B15C9JRZ8 316 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 TOX3O15405 576 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 PPFIA2O75334 1257 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 ZNF189O75820 626 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 CCL4P13236 92 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 ACP5P13686 325 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 XRCC1P18887 633 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 MAP4P27816 1152 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 HADHBP55084 474 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 LY6DQ14210 128 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 GALNT3Q14435 633 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 TGIF1Q15583 401 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 NKAIN2Q5VXU1 208 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 LRRTM4Q86VH4 590 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 ART4Q93070 314 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 GLYATL1Q969I3 302 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 TADA1Q96BN2 335 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 TEKT5Q96M29 485 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 CATSPER2Q96P56 530 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 VPS35Q96QK1 796 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 CHP1Q99653 195 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 TIMM29Q9BSF4 260 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 FAM117AQ9C073 453 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 ZCCHC2Q9C0B9 1178 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 GLOD4Q9HC38 313 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 FBXO8Q9NRD0 319 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 ATXN10Q9UBB4 475 aa13.44□□□□□ -0.26
CCHCR1-227ENST00000508852 CPNE7Q9UBL6 633 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms