RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SYT16Q17RD7 645 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 NSUN5P2Q63ZY6 315 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 KLHL35Q6PF15 583 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 PAPD4Q6PIY7 484 aaKnown RBP6.84□□□□□ -1.31
CHD1-205ENST00000508756 RNF168Q8IYW5 571 aaPredicted RBP6.84□□□□□ -1.31
CHD1-205ENST00000508756 WDTC1Q8N5D0 677 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 HM13Q8TCT9 377 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 USP6NLQ92738 828 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 SKA1Q96BD8 255 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 ELMOD3Q96FG2 381 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 INPP4AQ96PE3 977 aaPredicted RBP6.84□□□□□ -1.31
CHD1-205ENST00000508756 SMC6Q96SB8 1091 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 SYT17Q9BSW7 474 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 ZHX3Q9H4I2 956 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 TCF7L2Q9NQB0 619 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 SETD4Q9NVD3 440 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 MTMR10Q9NXD2 777 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 FBXW11Q9UKB1 542 aa6.84□□□□□ -1.31
CHD1-205ENST00000508756 ASPDHA6ND91 283 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 EIF4E1BA6NMX2 242 aaKnown RBP6.83□□□□□ -1.32
CHD1-205ENST00000508756 IGLV2-11P01706 119 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 ACADMP11310 421 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 CAPN3P20807 821 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 UGT1A1P22309 533 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 COG7P83436 770 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 ACSM2AQ08AH3 577 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 GTF2H2Q13888 395 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 EIF4A2Q14240 407 aaKnown RBP6.83□□□□□ -1.32
CHD1-205ENST00000508756 GTF2H2CQ6P1K8 395 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 CLEC17AQ6ZS10 378 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 ATG9AQ7Z3C6 839 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 MUC20Q8N307 709 aaPredicted RBP6.83□□□□□ -1.32
CHD1-205ENST00000508756 IL17RCQ8NAC3 791 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 HJURPQ8NCD3 748 aaPredicted RBP6.83□□□□□ -1.32
CHD1-205ENST00000508756 OR8K5Q8NH50 307 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 DNASE2BQ8WZ79 361 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 CMTM3Q96MX0 182 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 NODALQ96S42 347 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 ABCF3Q9NUQ8 709 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 HCFC1R1Q9NWW0 138 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 MTMR6Q9Y217 621 aa6.83□□□□□ -1.32
CHD1-205ENST00000508756 FRMD3A2A2Y4 597 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 KCNN4O15554 427 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 RUNX1T1Q06455 604 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 PDE1CQ14123 709 aaPredicted RBP6.82□□□□□ -1.32
CHD1-205ENST00000508756 ZSCAN23Q3MJ62 389 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 KRTCAP3Q53RY4 240 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 LCN10Q6JVE6 187 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 MAP7D3Q8IWC1 876 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 CIARTQ8N365 385 aaPredicted RBP6.82□□□□□ -1.32
CHD1-205ENST00000508756 OR13A1Q8NGR1 328 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 THAP6Q8TBB0 222 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 POMGNT1Q8WZA1 660 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 SH2D4AQ9H788 454 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 KAT14Q9H8E8 782 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 SEPT11Q9NVA2 429 aaKnown RBP6.82□□□□□ -1.32
CHD1-205ENST00000508756 DLGAP4Q9Y2H0 992 aa6.82□□□□□ -1.32
CHD1-205ENST00000508756 TCF20Q9UGU0 1960 aaKnown RBP6.82□□□□□ -1.32
CHD1-205ENST00000508756 RUSC2Q8N2Y8 1516 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 KANSL1LA0AUZ9 987 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 A8MZ25 164 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 C16orf97H3BN30 126 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 SCAMP1O15126 338 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 WDHD1O75717 1129 aaPredicted RBP6.81□□□□□ -1.32
CHD1-205ENST00000508756 UMODP07911 640 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 CETPP11597 493 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 POLR2CP19387 275 aaPredicted RBP6.81□□□□□ -1.32
CHD1-205ENST00000508756 RXRGP48443 463 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 AMPHP49418 695 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 GEMIN4P57678 1058 aaKnown RBP6.81□□□□□ -1.32
CHD1-205ENST00000508756 TFAP4Q01664 338 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 ASTE1Q2TB18 679 aaPredicted RBP6.81□□□□□ -1.32
CHD1-205ENST00000508756 MYLK3Q32MK0 819 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 TMEM35AQ53FP2 167 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 ACSM2BQ68CK6 577 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 SARM1Q6SZW1 724 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 TSPAN33Q86UF1 283 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 FTOQ9C0B1 505 aaKnown RBP eCLIP6.81□□□□□ -1.32
CHD1-205ENST00000508756 SIL1Q9H173 461 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 MAGIXQ9H6Y5 334 aa6.81□□□□□ -1.32
CHD1-205ENST00000508756 A0A1W2PP11 408 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 MYO1GB0I1T2 1018 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 ZNHIT1O43257 154 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 SH3BP5O60239 455 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 LMX1BO60663 402 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 WDR1O75083 606 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 DAB1O75553 588 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 ANXA7P20073 488 aaKnown RBP6.8□□□□□ -1.32
CHD1-205ENST00000508756 ACADLP28330 430 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 TM4SF1P30408 202 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 FMO5P49326 533 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 SREBF2Q12772 1141 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 STPG1Q5TH74 334 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 TMEM198Q66K66 360 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 OR7E24Q6IFN5 339 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 GDPD4Q6W3E5 623 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 RASGEF1CQ8N431 466 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 UTP15Q8TED0 518 aaKnown RBP6.8□□□□□ -1.32
CHD1-205ENST00000508756 SCFD2Q8WU76 684 aa6.8□□□□□ -1.32
CHD1-205ENST00000508756 EPB41L5Q9HCM4 733 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms